Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
AP1S1P61966 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S1P61966 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S1P61966 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.79■□□□□ 0.76
AP1S1P61966 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
AP1S1P61966 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.79■□□□□ 0.76
AP1S1P61966 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
AP1S1P61966 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.79■□□□□ 0.76
AP1S1P61966 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
AP1S1P61966 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.79■□□□□ 0.76
AP1S1P61966 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S1P61966 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S1P61966 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
AP1S1P61966 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S1P61966 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S1P61966 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.78■□□□□ 0.76
AP1S1P61966 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
AP1S1P61966 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
AP1S1P61966 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.78■□□□□ 0.76
AP1S1P61966 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.78■□□□□ 0.76
AP1S1P61966 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.78■□□□□ 0.76
AP1S1P61966 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.78■□□□□ 0.76
AP1S1P61966 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.78■□□□□ 0.76
AP1S1P61966 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.78■□□□□ 0.76
AP1S1P61966 C1QL1P1-201ENST00000568105 661 ntBASIC19.78■□□□□ 0.76
AP1S1P61966 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.78■□□□□ 0.76
AP1S1P61966 AP006294.2-201ENST00000641667 209 ntBASIC19.78■□□□□ 0.76
AP1S1P61966 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
AP1S1P61966 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.78■□□□□ 0.76
AP1S1P61966 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
AP1S1P61966 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S1P61966 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.77■□□□□ 0.76
AP1S1P61966 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.77■□□□□ 0.76
AP1S1P61966 KRT8P8-201ENST00000434750 1448 ntBASIC19.77■□□□□ 0.76
AP1S1P61966 AL135905.2-201ENST00000584934 1404 ntBASIC19.77■□□□□ 0.76
AP1S1P61966 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
AP1S1P61966 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S1P61966 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.77■□□□□ 0.76
AP1S1P61966 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S1P61966 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S1P61966 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
AP1S1P61966 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S1P61966 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.77■□□□□ 0.76
AP1S1P61966 AL353807.1-201ENST00000427475 662 ntBASIC19.77■□□□□ 0.76
AP1S1P61966 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.77■□□□□ 0.76
AP1S1P61966 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.77■□□□□ 0.76
AP1S1P61966 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S1P61966 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.77■□□□□ 0.76
AP1S1P61966 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.77■□□□□ 0.76
AP1S1P61966 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.77■□□□□ 0.76
AP1S1P61966 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.77■□□□□ 0.76
AP1S1P61966 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S1P61966 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S1P61966 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S1P61966 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S1P61966 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S1P61966 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S1P61966 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP1S1P61966 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP1S1P61966 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.76■□□□□ 0.75
AP1S1P61966 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
AP1S1P61966 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
AP1S1P61966 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
AP1S1P61966 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.76■□□□□ 0.75
AP1S1P61966 AC073130.3-201ENST00000624389 2278 ntBASIC19.76■□□□□ 0.75
AP1S1P61966 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.76■□□□□ 0.75
AP1S1P61966 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.76■□□□□ 0.75
AP1S1P61966 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.76■□□□□ 0.75
AP1S1P61966 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.76■□□□□ 0.75
AP1S1P61966 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.76■□□□□ 0.75
AP1S1P61966 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.76■□□□□ 0.75
AP1S1P61966 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.76■□□□□ 0.75
AP1S1P61966 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S1P61966 HTR7P1-201ENST00000538670 1336 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms