Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.7□□□□□ -0.22
CKS1BP61024 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CKS1BP61024 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.7□□□□□ -0.22
CKS1BP61024 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.7□□□□□ -0.22
CKS1BP61024 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.7□□□□□ -0.22
CKS1BP61024 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.7□□□□□ -0.22
CKS1BP61024 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 AC008764.7-201ENST00000593779 1081 ntBASIC13.7□□□□□ -0.22
CKS1BP61024 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.7□□□□□ -0.22
CKS1BP61024 AL136162.1-201ENST00000607711 1078 ntBASIC13.7□□□□□ -0.22
CKS1BP61024 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.7□□□□□ -0.22
CKS1BP61024 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.7□□□□□ -0.22
CKS1BP61024 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.7□□□□□ -0.22
CKS1BP61024 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.7□□□□□ -0.22
CKS1BP61024 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.7□□□□□ -0.22
CKS1BP61024 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
CKS1BP61024 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.69□□□□□ -0.22
CKS1BP61024 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CKS1BP61024 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CKS1BP61024 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
CKS1BP61024 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CKS1BP61024 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CKS1BP61024 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 AC141586.5-201ENST00000624546 2050 ntBASIC13.69□□□□□ -0.22
CKS1BP61024 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.69□□□□□ -0.22
CKS1BP61024 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CKS1BP61024 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC13.69□□□□□ -0.22
CKS1BP61024 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.69□□□□□ -0.22
CKS1BP61024 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 AC092720.2-201ENST00000602388 1665 ntBASIC13.69□□□□□ -0.22
CKS1BP61024 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
CKS1BP61024 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS1BP61024 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CKS1BP61024 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CKS1BP61024 AC135279.3-201ENST00000610945 1311 ntBASIC13.68□□□□□ -0.22
CKS1BP61024 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CKS1BP61024 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CKS1BP61024 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS1BP61024 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CKS1BP61024 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS1BP61024 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.68□□□□□ -0.22
CKS1BP61024 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.68□□□□□ -0.22
CKS1BP61024 AC008175.2-201ENST00000612840 297 ntBASIC13.68□□□□□ -0.22
CKS1BP61024 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.68□□□□□ -0.22
CKS1BP61024 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CKS1BP61024 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS1BP61024 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CKS1BP61024 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.68□□□□□ -0.22
CKS1BP61024 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CKS1BP61024 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CKS1BP61024 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.68□□□□□ -0.22
CKS1BP61024 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.68□□□□□ -0.22
CKS1BP61024 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS1BP61024 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.68□□□□□ -0.22
CKS1BP61024 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CKS1BP61024 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS1BP61024 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CKS1BP61024 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CKS1BP61024 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.68□□□□□ -0.22
CKS1BP61024 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CKS1BP61024 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS1BP61024 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.67□□□□□ -0.22
CKS1BP61024 TSPY26P-201ENST00000476365 1326 ntBASIC13.67□□□□□ -0.22
CKS1BP61024 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 AC124067.4-201ENST00000519691 2379 ntBASIC13.67□□□□□ -0.22
CKS1BP61024 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CKS1BP61024 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.67□□□□□ -0.22
CKS1BP61024 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.67□□□□□ -0.22
CKS1BP61024 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.67□□□□□ -0.22
CKS1BP61024 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms