Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.75■□□□□ 0.91
ERVFC1P60507 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ERVFC1P60507 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.75■□□□□ 0.91
ERVFC1P60507 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.75■□□□□ 0.91
ERVFC1P60507 TMEM179-206ENST00000616017 1645 ntBASIC20.75■□□□□ 0.91
ERVFC1P60507 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ERVFC1P60507 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ERVFC1P60507 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.74■□□□□ 0.91
ERVFC1P60507 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ERVFC1P60507 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ERVFC1P60507 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERVFC1P60507 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERVFC1P60507 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERVFC1P60507 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ERVFC1P60507 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ERVFC1P60507 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.74■□□□□ 0.91
ERVFC1P60507 SMG8-203ENST00000578922 2178 ntBASIC20.74■□□□□ 0.91
ERVFC1P60507 AC141257.4-201ENST00000634557 245 ntBASIC20.74■□□□□ 0.91
ERVFC1P60507 AC136944.6-201ENST00000634818 245 ntBASIC20.74■□□□□ 0.91
ERVFC1P60507 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERVFC1P60507 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ERVFC1P60507 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERVFC1P60507 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ERVFC1P60507 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.74■□□□□ 0.91
ERVFC1P60507 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.73■□□□□ 0.91
ERVFC1P60507 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERVFC1P60507 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERVFC1P60507 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ERVFC1P60507 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.73■□□□□ 0.91
ERVFC1P60507 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ERVFC1P60507 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.73■□□□□ 0.91
ERVFC1P60507 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.73■□□□□ 0.91
ERVFC1P60507 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERVFC1P60507 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.73■□□□□ 0.91
ERVFC1P60507 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERVFC1P60507 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERVFC1P60507 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.73■□□□□ 0.91
ERVFC1P60507 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ERVFC1P60507 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ERVFC1P60507 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.73■□□□□ 0.91
ERVFC1P60507 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ERVFC1P60507 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERVFC1P60507 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERVFC1P60507 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERVFC1P60507 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERVFC1P60507 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ERVFC1P60507 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.72■□□□□ 0.91
ERVFC1P60507 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ERVFC1P60507 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERVFC1P60507 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.72■□□□□ 0.91
ERVFC1P60507 AC092647.4-201ENST00000457211 535 ntBASIC20.72■□□□□ 0.91
ERVFC1P60507 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ERVFC1P60507 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
ERVFC1P60507 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.72■□□□□ 0.91
ERVFC1P60507 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERVFC1P60507 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.72■□□□□ 0.91
ERVFC1P60507 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ERVFC1P60507 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
ERVFC1P60507 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERVFC1P60507 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.72■□□□□ 0.91
ERVFC1P60507 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.71■□□□□ 0.91
ERVFC1P60507 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERVFC1P60507 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERVFC1P60507 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERVFC1P60507 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERVFC1P60507 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
ERVFC1P60507 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.71■□□□□ 0.91
ERVFC1P60507 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.71■□□□□ 0.91
ERVFC1P60507 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.71■□□□□ 0.91
ERVFC1P60507 KRT18P56-201ENST00000507275 550 ntBASIC20.71■□□□□ 0.91
ERVFC1P60507 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
ERVFC1P60507 AP000550.4-202ENST00000639755 178 ntBASIC20.71■□□□□ 0.91
ERVFC1P60507 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ERVFC1P60507 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ERVFC1P60507 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
ERVFC1P60507 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.71■□□□□ 0.91
ERVFC1P60507 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
ERVFC1P60507 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERVFC1P60507 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ERVFC1P60507 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ERVFC1P60507 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERVFC1P60507 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERVFC1P60507 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERVFC1P60507 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.7■□□□□ 0.9
ERVFC1P60507 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERVFC1P60507 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERVFC1P60507 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
ERVFC1P60507 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.7■□□□□ 0.9
ERVFC1P60507 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.7■□□□□ 0.9
ERVFC1P60507 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.7■□□□□ 0.9
ERVFC1P60507 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERVFC1P60507 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.7■□□□□ 0.9
ERVFC1P60507 AC012676.1-201ENST00000574705 1949 ntBASIC20.7■□□□□ 0.9
ERVFC1P60507 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERVFC1P60507 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERVFC1P60507 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERVFC1P60507 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERVFC1P60507 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERVFC1P60507 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERVFC1P60507 TSPY17P-201ENST00000450329 467 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms