Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.54■□□□□ 0.4
CLRN1P58418 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLRN1P58418 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.54■□□□□ 0.4
CLRN1P58418 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.54■□□□□ 0.4
CLRN1P58418 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.54■□□□□ 0.4
CLRN1P58418 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.54■□□□□ 0.4
CLRN1P58418 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLRN1P58418 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLRN1P58418 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLRN1P58418 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.54■□□□□ 0.4
CLRN1P58418 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLRN1P58418 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.54■□□□□ 0.4
CLRN1P58418 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLRN1P58418 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLRN1P58418 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLRN1P58418 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.53■□□□□ 0.4
CLRN1P58418 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLRN1P58418 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLRN1P58418 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLRN1P58418 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLRN1P58418 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLRN1P58418 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.53■□□□□ 0.4
CLRN1P58418 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.53■□□□□ 0.4
CLRN1P58418 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.53■□□□□ 0.4
CLRN1P58418 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.53■□□□□ 0.4
CLRN1P58418 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.53■□□□□ 0.4
CLRN1P58418 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.53■□□□□ 0.4
CLRN1P58418 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLRN1P58418 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.53■□□□□ 0.4
CLRN1P58418 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLRN1P58418 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLRN1P58418 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLRN1P58418 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLRN1P58418 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLRN1P58418 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.53■□□□□ 0.4
CLRN1P58418 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.53■□□□□ 0.4
CLRN1P58418 AC116351.2-201ENST00000606540 1585 ntBASIC17.53■□□□□ 0.4
CLRN1P58418 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLRN1P58418 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLRN1P58418 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CLRN1P58418 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLRN1P58418 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.52■□□□□ 0.4
CLRN1P58418 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.52■□□□□ 0.4
CLRN1P58418 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLRN1P58418 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLRN1P58418 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLRN1P58418 ID1-201ENST00000376105 1233 ntBASIC17.52■□□□□ 0.4
CLRN1P58418 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.52■□□□□ 0.4
CLRN1P58418 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.52■□□□□ 0.4
CLRN1P58418 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.52■□□□□ 0.4
CLRN1P58418 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.52■□□□□ 0.4
CLRN1P58418 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.52■□□□□ 0.4
CLRN1P58418 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLRN1P58418 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLRN1P58418 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLRN1P58418 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLRN1P58418 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLRN1P58418 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.52■□□□□ 0.39
CLRN1P58418 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLRN1P58418 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLRN1P58418 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.52■□□□□ 0.39
CLRN1P58418 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.51■□□□□ 0.39
CLRN1P58418 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.51■□□□□ 0.39
CLRN1P58418 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLRN1P58418 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.51■□□□□ 0.39
CLRN1P58418 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLRN1P58418 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.51■□□□□ 0.39
CLRN1P58418 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.51■□□□□ 0.39
CLRN1P58418 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.51■□□□□ 0.39
CLRN1P58418 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.51■□□□□ 0.39
CLRN1P58418 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLRN1P58418 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLRN1P58418 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLRN1P58418 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLRN1P58418 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLRN1P58418 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLRN1P58418 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.51■□□□□ 0.39
CLRN1P58418 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLRN1P58418 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.51■□□□□ 0.39
CLRN1P58418 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.51■□□□□ 0.39
CLRN1P58418 RPS2P52-201ENST00000469610 820 ntBASIC17.51■□□□□ 0.39
CLRN1P58418 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLRN1P58418 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.51■□□□□ 0.39
CLRN1P58418 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.51■□□□□ 0.39
CLRN1P58418 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.51■□□□□ 0.39
CLRN1P58418 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.51■□□□□ 0.39
CLRN1P58418 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.51■□□□□ 0.39
CLRN1P58418 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLRN1P58418 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLRN1P58418 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLRN1P58418 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.51■□□□□ 0.39
CLRN1P58418 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLRN1P58418 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.51■□□□□ 0.39
CLRN1P58418 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLRN1P58418 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLRN1P58418 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLRN1P58418 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.5■□□□□ 0.39
CLRN1P58418 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLRN1P58418 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLRN1P58418 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms