Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN2P57739 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN2P57739 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
CLDN2P57739 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN2P57739 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CLDN2P57739 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN2P57739 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN2P57739 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.4■□□□□ 0.7
CLDN2P57739 AC004980.1-204ENST00000429707 299 ntBASIC19.4■□□□□ 0.7
CLDN2P57739 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN2P57739 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN2P57739 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN2P57739 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN2P57739 AC010331.1-201ENST00000611423 582 ntBASIC19.4■□□□□ 0.7
CLDN2P57739 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLDN2P57739 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN2P57739 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN2P57739 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN2P57739 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN2P57739 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN2P57739 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN2P57739 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN2P57739 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.39■□□□□ 0.7
CLDN2P57739 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN2P57739 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN2P57739 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN2P57739 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN2P57739 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN2P57739 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN2P57739 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN2P57739 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN2P57739 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN2P57739 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN2P57739 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN2P57739 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN2P57739 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN2P57739 AC011506.1-201ENST00000474329 610 ntBASIC19.39■□□□□ 0.69
CLDN2P57739 FITM1-202ENST00000559294 800 ntBASIC19.39■□□□□ 0.69
CLDN2P57739 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN2P57739 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CLDN2P57739 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN2P57739 TMEM179-206ENST00000616017 1645 ntBASIC19.39■□□□□ 0.69
CLDN2P57739 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN2P57739 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN2P57739 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN2P57739 AP005212.1-201ENST00000581547 1997 ntBASIC19.39■□□□□ 0.69
CLDN2P57739 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN2P57739 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN2P57739 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN2P57739 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLDN2P57739 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN2P57739 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN2P57739 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN2P57739 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN2P57739 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN2P57739 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN2P57739 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
CLDN2P57739 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN2P57739 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN2P57739 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.38■□□□□ 0.69
CLDN2P57739 FSCN1P1-201ENST00000568912 1481 ntBASIC19.38■□□□□ 0.69
CLDN2P57739 AC145285.6-201ENST00000604632 637 ntBASIC19.38■□□□□ 0.69
CLDN2P57739 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN2P57739 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN2P57739 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN2P57739 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN2P57739 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN2P57739 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN2P57739 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN2P57739 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CLDN2P57739 LINC01568-207ENST00000641790 1380 ntBASIC19.37■□□□□ 0.69
CLDN2P57739 AC092667.1-201ENST00000434301 2586 ntBASIC19.37■□□□□ 0.69
CLDN2P57739 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN2P57739 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLDN2P57739 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN2P57739 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN2P57739 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN2P57739 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN2P57739 B3GAT3P1-201ENST00000471720 806 ntBASIC19.37■□□□□ 0.69
CLDN2P57739 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN2P57739 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN2P57739 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLDN2P57739 NAPSB-206ENST00000562112 1266 ntBASIC19.37■□□□□ 0.69
CLDN2P57739 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN2P57739 AC010947.1-201ENST00000623454 693 ntBASIC19.37■□□□□ 0.69
CLDN2P57739 AC131212.4-201ENST00000623606 975 ntBASIC19.37■□□□□ 0.69
CLDN2P57739 HLA-A-209ENST00000638375 975 ntBASIC19.37■□□□□ 0.69
CLDN2P57739 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN2P57739 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN2P57739 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN2P57739 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN2P57739 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN2P57739 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN2P57739 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN2P57739 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN2P57739 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
CLDN2P57739 AC026271.3-201ENST00000571884 352 ntBASIC19.36■□□□□ 0.69
CLDN2P57739 RN7SL850P-201ENST00000579959 291 ntBASIC19.36■□□□□ 0.69
CLDN2P57739 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN2P57739 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms