Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUBP1P53384 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NUBP1P53384 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.59■□□□□ 0.73
NUBP1P53384 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.59■□□□□ 0.73
NUBP1P53384 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.59■□□□□ 0.73
NUBP1P53384 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.59■□□□□ 0.73
NUBP1P53384 AL031008.1-201ENST00000619963 541 ntBASIC19.59■□□□□ 0.73
NUBP1P53384 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
NUBP1P53384 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUBP1P53384 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUBP1P53384 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.58■□□□□ 0.73
NUBP1P53384 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NUBP1P53384 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.58■□□□□ 0.73
NUBP1P53384 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUBP1P53384 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.58■□□□□ 0.73
NUBP1P53384 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.58■□□□□ 0.72
NUBP1P53384 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUBP1P53384 TSPY19P-201ENST00000418461 509 ntBASIC19.58■□□□□ 0.72
NUBP1P53384 TSPY18P-201ENST00000441642 509 ntBASIC19.58■□□□□ 0.72
NUBP1P53384 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC19.58■□□□□ 0.72
NUBP1P53384 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.58■□□□□ 0.72
NUBP1P53384 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUBP1P53384 MIR3180-1-201ENST00000580374 94 ntBASIC19.58■□□□□ 0.72
NUBP1P53384 MIR3180-3-201ENST00000584616 94 ntBASIC19.58■□□□□ 0.72
NUBP1P53384 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.58■□□□□ 0.72
NUBP1P53384 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUBP1P53384 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUBP1P53384 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
NUBP1P53384 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.58■□□□□ 0.72
NUBP1P53384 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUBP1P53384 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUBP1P53384 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUBP1P53384 KRT18P1-202ENST00000452408 1331 ntBASIC19.57■□□□□ 0.72
NUBP1P53384 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUBP1P53384 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NUBP1P53384 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.57■□□□□ 0.72
NUBP1P53384 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.57■□□□□ 0.72
NUBP1P53384 KRT18P13-201ENST00000400056 1290 ntBASIC19.57■□□□□ 0.72
NUBP1P53384 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.57■□□□□ 0.72
NUBP1P53384 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.57■□□□□ 0.72
NUBP1P53384 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC19.57■□□□□ 0.72
NUBP1P53384 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.57■□□□□ 0.72
NUBP1P53384 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUBP1P53384 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUBP1P53384 AL136370.1-201ENST00000608166 691 ntBASIC19.57■□□□□ 0.72
NUBP1P53384 AL121772.3-201ENST00000610840 674 ntBASIC19.57■□□□□ 0.72
NUBP1P53384 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUBP1P53384 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.57■□□□□ 0.72
NUBP1P53384 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.57■□□□□ 0.72
NUBP1P53384 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUBP1P53384 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.57■□□□□ 0.72
NUBP1P53384 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUBP1P53384 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.57■□□□□ 0.72
NUBP1P53384 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUBP1P53384 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUBP1P53384 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUBP1P53384 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUBP1P53384 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.56■□□□□ 0.72
NUBP1P53384 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUBP1P53384 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUBP1P53384 HBZP1-201ENST00000354915 429 ntBASIC19.56■□□□□ 0.72
NUBP1P53384 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.56■□□□□ 0.72
NUBP1P53384 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.56■□□□□ 0.72
NUBP1P53384 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUBP1P53384 EMBP1-201ENST00000458200 901 ntBASIC19.56■□□□□ 0.72
NUBP1P53384 Z85996.1-201ENST00000494644 937 ntBASIC19.56■□□□□ 0.72
NUBP1P53384 GCSHP2-201ENST00000560971 527 ntBASIC19.56■□□□□ 0.72
NUBP1P53384 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUBP1P53384 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUBP1P53384 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.56■□□□□ 0.72
NUBP1P53384 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUBP1P53384 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NUBP1P53384 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUBP1P53384 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUBP1P53384 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUBP1P53384 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUBP1P53384 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NUBP1P53384 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.55■□□□□ 0.72
NUBP1P53384 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.55■□□□□ 0.72
NUBP1P53384 SPDYE13P-201ENST00000445314 798 ntBASIC19.55■□□□□ 0.72
NUBP1P53384 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.55■□□□□ 0.72
NUBP1P53384 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC19.55■□□□□ 0.72
NUBP1P53384 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUBP1P53384 AC011498.5-201ENST00000592027 486 ntBASIC19.55■□□□□ 0.72
NUBP1P53384 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUBP1P53384 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC19.55■□□□□ 0.72
NUBP1P53384 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUBP1P53384 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUBP1P53384 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.55■□□□□ 0.72
NUBP1P53384 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUBP1P53384 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUBP1P53384 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUBP1P53384 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NUBP1P53384 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.54■□□□□ 0.72
NUBP1P53384 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUBP1P53384 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.54■□□□□ 0.72
NUBP1P53384 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NUBP1P53384 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.54■□□□□ 0.72
NUBP1P53384 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUBP1P53384 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms