Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PDE6BP35913 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDE6BP35913 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDE6BP35913 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.29■■□□□ 1.48
PDE6BP35913 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE6BP35913 TMEM179-206ENST00000616017 1645 ntBASIC24.28■■□□□ 1.48
PDE6BP35913 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE6BP35913 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE6BP35913 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE6BP35913 BET1L-202ENST00000332865 533 ntTSL 5 BASIC24.28■■□□□ 1.48
PDE6BP35913 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PDE6BP35913 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
PDE6BP35913 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE6BP35913 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.28■■□□□ 1.48
PDE6BP35913 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE6BP35913 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PDE6BP35913 AL359075.1-203ENST00000462729 1002 ntBASIC24.28■■□□□ 1.48
PDE6BP35913 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.28■■□□□ 1.48
PDE6BP35913 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.28■■□□□ 1.48
PDE6BP35913 AL441883.1-201ENST00000566170 1045 ntBASIC24.28■■□□□ 1.48
PDE6BP35913 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC24.28■■□□□ 1.48
PDE6BP35913 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE6BP35913 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.28■■□□□ 1.48
PDE6BP35913 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PDE6BP35913 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE6BP35913 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.28■■□□□ 1.48
PDE6BP35913 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.27■■□□□ 1.48
PDE6BP35913 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PDE6BP35913 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PDE6BP35913 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC24.27■■□□□ 1.48
PDE6BP35913 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE6BP35913 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE6BP35913 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE6BP35913 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.27■■□□□ 1.48
PDE6BP35913 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.27■■□□□ 1.48
PDE6BP35913 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.27■■□□□ 1.48
PDE6BP35913 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE6BP35913 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.27■■□□□ 1.48
PDE6BP35913 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.27■■□□□ 1.48
PDE6BP35913 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.27■■□□□ 1.48
PDE6BP35913 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC24.27■■□□□ 1.48
PDE6BP35913 AC008622.2-201ENST00000617006 1229 ntBASIC24.27■■□□□ 1.48
PDE6BP35913 AC116407.4-201ENST00000623319 1061 ntBASIC24.27■■□□□ 1.48
PDE6BP35913 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.27■■□□□ 1.48
PDE6BP35913 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.27■■□□□ 1.48
PDE6BP35913 AC005332.1-201ENST00000577698 1310 ntBASIC24.27■■□□□ 1.48
PDE6BP35913 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDE6BP35913 FEM1AP4-201ENST00000443167 1987 ntBASIC24.27■■□□□ 1.48
PDE6BP35913 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.27■■□□□ 1.48
PDE6BP35913 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC24.27■■□□□ 1.48
PDE6BP35913 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDE6BP35913 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDE6BP35913 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC24.26■■□□□ 1.47
PDE6BP35913 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDE6BP35913 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC24.26■■□□□ 1.47
PDE6BP35913 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC24.26■■□□□ 1.47
PDE6BP35913 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC24.26■■□□□ 1.47
PDE6BP35913 AL023973.1-201ENST00000624619 620 ntBASIC24.26■■□□□ 1.47
PDE6BP35913 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.26■■□□□ 1.47
PDE6BP35913 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDE6BP35913 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.26■■□□□ 1.47
PDE6BP35913 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDE6BP35913 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDE6BP35913 KRT8P8-201ENST00000434750 1448 ntBASIC24.26■■□□□ 1.47
PDE6BP35913 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDE6BP35913 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDE6BP35913 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDE6BP35913 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDE6BP35913 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDE6BP35913 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDE6BP35913 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDE6BP35913 AC026396.1-201ENST00000419388 421 ntBASIC24.25■■□□□ 1.47
PDE6BP35913 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDE6BP35913 HCG4P8-203ENST00000443049 980 ntBASIC24.25■■□□□ 1.47
PDE6BP35913 PP7080-204ENST00000510714 601 ntTSL 3 BASIC24.25■■□□□ 1.47
PDE6BP35913 PRSS44-201ENST00000515154 1146 ntBASIC24.25■■□□□ 1.47
PDE6BP35913 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDE6BP35913 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.25■■□□□ 1.47
PDE6BP35913 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDE6BP35913 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.25■■□□□ 1.47
PDE6BP35913 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDE6BP35913 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDE6BP35913 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.25■■□□□ 1.47
PDE6BP35913 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
PDE6BP35913 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDE6BP35913 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.24■■□□□ 1.47
PDE6BP35913 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.24■■□□□ 1.47
PDE6BP35913 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDE6BP35913 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDE6BP35913 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.24■■□□□ 1.47
PDE6BP35913 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDE6BP35913 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.24■■□□□ 1.47
PDE6BP35913 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDE6BP35913 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC24.24■■□□□ 1.47
PDE6BP35913 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
PDE6BP35913 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC24.24■■□□□ 1.47
PDE6BP35913 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.24■■□□□ 1.47
PDE6BP35913 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC24.24■■□□□ 1.47
PDE6BP35913 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDE6BP35913 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms