Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CKS2P33552 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.44□□□□□ -0.1
CKS2P33552 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.44□□□□□ -0.1
CKS2P33552 AL512631.2-201ENST00000604634 923 ntBASIC14.44□□□□□ -0.1
CKS2P33552 AC120498.10-201ENST00000621827 505 ntBASIC14.44□□□□□ -0.1
CKS2P33552 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CKS2P33552 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.44□□□□□ -0.1
CKS2P33552 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CKS2P33552 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.44□□□□□ -0.1
CKS2P33552 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CKS2P33552 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CKS2P33552 CROCCP1-201ENST00000426910 5675 ntBASIC14.44□□□□□ -0.1
CKS2P33552 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
CKS2P33552 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.43□□□□□ -0.1
CKS2P33552 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CKS2P33552 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
CKS2P33552 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CKS2P33552 AC009237.14-201ENST00000609975 1594 ntBASIC14.43□□□□□ -0.1
CKS2P33552 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CKS2P33552 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.43□□□□□ -0.1
CKS2P33552 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.43□□□□□ -0.1
CKS2P33552 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.43□□□□□ -0.1
CKS2P33552 IGHV3-19-201ENST00000521488 291 ntBASIC14.43□□□□□ -0.1
CKS2P33552 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.43□□□□□ -0.1
CKS2P33552 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.43□□□□□ -0.1
CKS2P33552 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CKS2P33552 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS2P33552 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CKS2P33552 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CKS2P33552 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.42□□□□□ -0.1
CKS2P33552 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CKS2P33552 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CKS2P33552 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 AC018470.1-201ENST00000624790 3129 ntBASIC14.42□□□□□ -0.1
CKS2P33552 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CKS2P33552 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.42□□□□□ -0.1
CKS2P33552 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.42□□□□□ -0.1
CKS2P33552 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.42□□□□□ -0.1
CKS2P33552 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.42□□□□□ -0.1
CKS2P33552 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.42□□□□□ -0.1
CKS2P33552 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CKS2P33552 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CKS2P33552 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.42□□□□□ -0.1
CKS2P33552 NFIC-211ENST00000641145 8399 ntBASIC14.42□□□□□ -0.1
CKS2P33552 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS2P33552 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
CKS2P33552 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CKS2P33552 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CKS2P33552 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS2P33552 KRT16P2-201ENST00000414673 1423 ntBASIC14.41□□□□□ -0.1
CKS2P33552 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.41□□□□□ -0.1
CKS2P33552 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS2P33552 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKS2P33552 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CKS2P33552 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms