Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA3P32297 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.67■□□□□ 0.9
CHRNA3P32297 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA3P32297 PTBP1P-201ENST00000554374 1601 ntBASIC20.67■□□□□ 0.9
CHRNA3P32297 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA3P32297 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA3P32297 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.66■□□□□ 0.9
CHRNA3P32297 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA3P32297 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CHRNA3P32297 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA3P32297 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA3P32297 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.66■□□□□ 0.9
CHRNA3P32297 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CHRNA3P32297 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA3P32297 TMEM191A-211ENST00000637163 1067 ntBASIC20.66■□□□□ 0.9
CHRNA3P32297 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA3P32297 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA3P32297 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA3P32297 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA3P32297 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.66■□□□□ 0.9
CHRNA3P32297 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CHRNA3P32297 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA3P32297 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHRNA3P32297 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRNA3P32297 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHRNA3P32297 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CHRNA3P32297 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CHRNA3P32297 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRNA3P32297 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CHRNA3P32297 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA3P32297 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.64■□□□□ 0.9
CHRNA3P32297 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHRNA3P32297 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.64■□□□□ 0.9
CHRNA3P32297 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHRNA3P32297 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRNA3P32297 KRT8P17-201ENST00000453110 1448 ntBASIC20.64■□□□□ 0.89
CHRNA3P32297 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA3P32297 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.64■□□□□ 0.89
CHRNA3P32297 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA3P32297 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRNA3P32297 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.64■□□□□ 0.89
CHRNA3P32297 POU5F1P3-201ENST00000428824 1078 ntBASIC20.64■□□□□ 0.89
CHRNA3P32297 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHRNA3P32297 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.64■□□□□ 0.89
CHRNA3P32297 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.64■□□□□ 0.89
CHRNA3P32297 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA3P32297 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.64■□□□□ 0.89
CHRNA3P32297 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CHRNA3P32297 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CHRNA3P32297 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA3P32297 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA3P32297 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA3P32297 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNA3P32297 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNA3P32297 AC004408.2-201ENST00000623613 2777 ntBASIC20.63■□□□□ 0.89
CHRNA3P32297 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRNA3P32297 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNA3P32297 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNA3P32297 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRNA3P32297 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNA3P32297 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHRNA3P32297 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNA3P32297 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRNA3P32297 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNA3P32297 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNA3P32297 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNA3P32297 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.63■□□□□ 0.89
CHRNA3P32297 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.63■□□□□ 0.89
CHRNA3P32297 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHRNA3P32297 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.63■□□□□ 0.89
CHRNA3P32297 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.63■□□□□ 0.89
CHRNA3P32297 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHRNA3P32297 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.63■□□□□ 0.89
CHRNA3P32297 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.63■□□□□ 0.89
CHRNA3P32297 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRNA3P32297 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRNA3P32297 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRNA3P32297 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.63■□□□□ 0.89
CHRNA3P32297 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms