Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RXRBP28702 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC25.91■■□□□ 1.74
RXRBP28702 CHCHD2P8-201ENST00000429873 447 ntBASIC25.91■■□□□ 1.74
RXRBP28702 KRT16P4-201ENST00000453883 522 ntBASIC25.91■■□□□ 1.74
RXRBP28702 CFL1-212ENST00000531413 636 ntTSL 3 BASIC25.91■■□□□ 1.74
RXRBP28702 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC25.91■■□□□ 1.74
RXRBP28702 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC25.9■■□□□ 1.74
RXRBP28702 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RXRBP28702 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC25.9■■□□□ 1.74
RXRBP28702 SLC25A1P1-201ENST00000528351 927 ntBASIC25.9■■□□□ 1.74
RXRBP28702 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RXRBP28702 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
RXRBP28702 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.9■■□□□ 1.74
RXRBP28702 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RXRBP28702 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.9■■□□□ 1.74
RXRBP28702 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC25.89■■□□□ 1.74
RXRBP28702 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.89■■□□□ 1.74
RXRBP28702 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RXRBP28702 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC25.89■■□□□ 1.74
RXRBP28702 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC25.89■■□□□ 1.74
RXRBP28702 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RXRBP28702 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RXRBP28702 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RXRBP28702 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
RXRBP28702 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RXRBP28702 BX842568.4-201ENST00000421222 227 ntBASIC25.89■■□□□ 1.74
RXRBP28702 AC005104.2-201ENST00000427818 678 ntBASIC25.89■■□□□ 1.74
RXRBP28702 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC25.89■■□□□ 1.74
RXRBP28702 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RXRBP28702 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
RXRBP28702 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RXRBP28702 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RXRBP28702 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
RXRBP28702 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC25.89■■□□□ 1.74
RXRBP28702 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC25.89■■□□□ 1.74
RXRBP28702 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.89■■□□□ 1.74
RXRBP28702 AC116351.2-201ENST00000606540 1585 ntBASIC25.89■■□□□ 1.73
RXRBP28702 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
RXRBP28702 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
RXRBP28702 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
RXRBP28702 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RXRBP28702 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RXRBP28702 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC25.88■■□□□ 1.73
RXRBP28702 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC25.88■■□□□ 1.73
RXRBP28702 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.88■■□□□ 1.73
RXRBP28702 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RXRBP28702 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
RXRBP28702 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
RXRBP28702 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC25.88■■□□□ 1.73
RXRBP28702 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC25.88■■□□□ 1.73
RXRBP28702 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
RXRBP28702 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC25.88■■□□□ 1.73
RXRBP28702 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
RXRBP28702 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RXRBP28702 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.87■■□□□ 1.73
RXRBP28702 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RXRBP28702 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
RXRBP28702 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RXRBP28702 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RXRBP28702 PMS2P2-201ENST00000425039 1128 ntBASIC25.87■■□□□ 1.73
RXRBP28702 COX10-202ENST00000429152 875 ntTSL 2 BASIC25.87■■□□□ 1.73
RXRBP28702 POLD2P1-201ENST00000511220 997 ntBASIC25.87■■□□□ 1.73
RXRBP28702 ABR-217ENST00000572441 563 ntTSL 4 BASIC25.87■■□□□ 1.73
RXRBP28702 AC027796.2-201ENST00000575326 344 ntBASIC25.87■■□□□ 1.73
RXRBP28702 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
RXRBP28702 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
RXRBP28702 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
RXRBP28702 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RXRBP28702 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
RXRBP28702 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC25.86■■□□□ 1.73
RXRBP28702 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RXRBP28702 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RXRBP28702 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC25.86■■□□□ 1.73
RXRBP28702 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RXRBP28702 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC25.86■■□□□ 1.73
RXRBP28702 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RXRBP28702 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RXRBP28702 TPM1-218ENST00000559281 851 ntTSL 5 BASIC25.86■■□□□ 1.73
RXRBP28702 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC25.86■■□□□ 1.73
RXRBP28702 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC25.86■■□□□ 1.73
RXRBP28702 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
RXRBP28702 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.86■■□□□ 1.73
RXRBP28702 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.86■■□□□ 1.73
RXRBP28702 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RXRBP28702 PMS2P7-201ENST00000506558 1336 ntBASIC25.86■■□□□ 1.73
RXRBP28702 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.86■■□□□ 1.73
RXRBP28702 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
RXRBP28702 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RXRBP28702 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RXRBP28702 DFFB-203ENST00000341385 572 ntTSL 5 BASIC25.85■■□□□ 1.73
RXRBP28702 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC25.85■■□□□ 1.73
RXRBP28702 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC25.85■■□□□ 1.73
RXRBP28702 LINC00265-3P-201ENST00000447588 903 ntBASIC25.85■■□□□ 1.73
RXRBP28702 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC25.85■■□□□ 1.73
RXRBP28702 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC25.85■■□□□ 1.73
RXRBP28702 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC25.85■■□□□ 1.73
RXRBP28702 AL691403.2-201ENST00000618460 490 ntBASIC25.85■■□□□ 1.73
RXRBP28702 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
RXRBP28702 KRT8P17-201ENST00000453110 1448 ntBASIC25.85■■□□□ 1.73
RXRBP28702 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms