Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ATF4P18848 AL138724.1-201ENST00000606771 1088 ntBASIC16.38■□□□□ 0.21
ATF4P18848 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.38■□□□□ 0.21
ATF4P18848 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATF4P18848 AC020907.5-201ENST00000624372 1936 ntBASIC16.38■□□□□ 0.21
ATF4P18848 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATF4P18848 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATF4P18848 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
ATF4P18848 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
ATF4P18848 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ATF4P18848 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATF4P18848 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.38■□□□□ 0.21
ATF4P18848 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATF4P18848 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATF4P18848 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATF4P18848 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATF4P18848 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATF4P18848 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.38■□□□□ 0.21
ATF4P18848 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.38■□□□□ 0.21
ATF4P18848 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATF4P18848 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATF4P18848 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
ATF4P18848 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATF4P18848 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.37■□□□□ 0.21
ATF4P18848 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATF4P18848 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.37■□□□□ 0.21
ATF4P18848 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATF4P18848 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATF4P18848 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATF4P18848 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.37■□□□□ 0.21
ATF4P18848 AL049796.1-201ENST00000565336 1766 ntBASIC16.37■□□□□ 0.21
ATF4P18848 AC010141.3-201ENST00000456659 717 ntBASIC16.37■□□□□ 0.21
ATF4P18848 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.37■□□□□ 0.21
ATF4P18848 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
ATF4P18848 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATF4P18848 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATF4P18848 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATF4P18848 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ATF4P18848 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATF4P18848 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.37■□□□□ 0.21
ATF4P18848 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ATF4P18848 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ATF4P18848 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATF4P18848 AL512408.1-201ENST00000569378 2000 ntBASIC16.36■□□□□ 0.21
ATF4P18848 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ATF4P18848 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ATF4P18848 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.36■□□□□ 0.21
ATF4P18848 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.36■□□□□ 0.21
ATF4P18848 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.36■□□□□ 0.21
ATF4P18848 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.36■□□□□ 0.21
ATF4P18848 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.36■□□□□ 0.21
ATF4P18848 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
ATF4P18848 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.36■□□□□ 0.21
ATF4P18848 AL031432.3-201ENST00000607698 485 ntBASIC16.36■□□□□ 0.21
ATF4P18848 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ATF4P18848 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.36■□□□□ 0.21
ATF4P18848 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ATF4P18848 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.36■□□□□ 0.21
ATF4P18848 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ATF4P18848 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
ATF4P18848 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATF4P18848 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
ATF4P18848 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.35■□□□□ 0.21
ATF4P18848 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ATF4P18848 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ATF4P18848 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
ATF4P18848 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
ATF4P18848 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ATF4P18848 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 AC006128.1-201ENST00000624704 1661 ntBASIC16.35■□□□□ 0.21
ATF4P18848 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.35■□□□□ 0.21
ATF4P18848 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.35■□□□□ 0.21
ATF4P18848 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ATF4P18848 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATF4P18848 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ATF4P18848 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.35■□□□□ 0.21
ATF4P18848 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.35■□□□□ 0.21
ATF4P18848 AC068880.1-201ENST00000507289 2297 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms