Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PRKCAP17252 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.13■□□□□ 0.49
PRKCAP17252 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.13■□□□□ 0.49
PRKCAP17252 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 AC005829.2-201ENST00000571422 1056 ntBASIC18.13■□□□□ 0.49
PRKCAP17252 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.13■□□□□ 0.49
PRKCAP17252 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.12■□□□□ 0.49
PRKCAP17252 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.12■□□□□ 0.49
PRKCAP17252 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRKCAP17252 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.12■□□□□ 0.49
PRKCAP17252 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRKCAP17252 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
PRKCAP17252 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 AL390719.1-204ENST00000412397 1219 ntBASIC18.12■□□□□ 0.49
PRKCAP17252 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.12■□□□□ 0.49
PRKCAP17252 PNMA6B-201ENST00000538162 1200 ntBASIC18.12■□□□□ 0.49
PRKCAP17252 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.12■□□□□ 0.49
PRKCAP17252 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PRKCAP17252 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 KRT16P6-202ENST00000425692 1426 ntBASIC18.12■□□□□ 0.49
PRKCAP17252 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.12■□□□□ 0.49
PRKCAP17252 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.12■□□□□ 0.49
PRKCAP17252 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRKCAP17252 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.11■□□□□ 0.49
PRKCAP17252 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PRKCAP17252 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.11■□□□□ 0.49
PRKCAP17252 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.11■□□□□ 0.49
PRKCAP17252 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.11■□□□□ 0.49
PRKCAP17252 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.11■□□□□ 0.49
PRKCAP17252 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.11■□□□□ 0.49
PRKCAP17252 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.11■□□□□ 0.49
PRKCAP17252 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PRKCAP17252 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.11■□□□□ 0.49
PRKCAP17252 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PRKCAP17252 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.11■□□□□ 0.49
PRKCAP17252 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PRKCAP17252 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRKCAP17252 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.1■□□□□ 0.49
PRKCAP17252 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRKCAP17252 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRKCAP17252 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRKCAP17252 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRKCAP17252 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRKCAP17252 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRKCAP17252 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRKCAP17252 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.1■□□□□ 0.49
PRKCAP17252 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.1■□□□□ 0.49
PRKCAP17252 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.1■□□□□ 0.49
PRKCAP17252 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PRKCAP17252 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.1■□□□□ 0.49
PRKCAP17252 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
PRKCAP17252 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms