Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.89■□□□□ 0.77
HLA-EP13747 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.89■□□□□ 0.77
HLA-EP13747 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-EP13747 AL391422.3-201ENST00000603791 2761 ntBASIC19.89■□□□□ 0.77
HLA-EP13747 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-EP13747 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
HLA-EP13747 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HLA-EP13747 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 MIR6786-201ENST00000616843 113 ntBASIC19.88■□□□□ 0.77
HLA-EP13747 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HLA-EP13747 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HLA-EP13747 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 AL512408.1-201ENST00000569378 2000 ntBASIC19.88■□□□□ 0.77
HLA-EP13747 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HLA-EP13747 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-EP13747 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-EP13747 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HLA-EP13747 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-EP13747 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
HLA-EP13747 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HLA-EP13747 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-EP13747 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
HLA-EP13747 AL445675.2-201ENST00000620291 557 ntBASIC19.87■□□□□ 0.77
HLA-EP13747 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-EP13747 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-EP13747 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-EP13747 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-EP13747 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
HLA-EP13747 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-EP13747 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-EP13747 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.86■□□□□ 0.77
HLA-EP13747 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-EP13747 AL031985.4-201ENST00000642138 673 ntBASIC19.86■□□□□ 0.77
HLA-EP13747 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
HLA-EP13747 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-EP13747 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-EP13747 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-EP13747 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-EP13747 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-EP13747 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-EP13747 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-EP13747 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-EP13747 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-EP13747 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-EP13747 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-EP13747 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-EP13747 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-EP13747 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-EP13747 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-EP13747 RCN1P1-201ENST00000400413 996 ntBASIC19.85■□□□□ 0.77
HLA-EP13747 MESTP1-201ENST00000404287 994 ntBASIC19.85■□□□□ 0.77
HLA-EP13747 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-EP13747 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.85■□□□□ 0.77
HLA-EP13747 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.85■□□□□ 0.77
HLA-EP13747 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.85■□□□□ 0.77
HLA-EP13747 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-EP13747 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-EP13747 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.85■□□□□ 0.77
HLA-EP13747 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-EP13747 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-EP13747 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-EP13747 SLC25A24-204ENST00000569674 2357 ntBASIC19.85■□□□□ 0.77
HLA-EP13747 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-EP13747 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-EP13747 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-EP13747 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-EP13747 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-EP13747 AP005212.1-201ENST00000581547 1997 ntBASIC19.84■□□□□ 0.77
HLA-EP13747 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HLA-EP13747 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-EP13747 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-EP13747 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HLA-EP13747 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-EP13747 AC092667.1-201ENST00000434301 2586 ntBASIC19.84■□□□□ 0.77
HLA-EP13747 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-EP13747 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HLA-EP13747 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.84■□□□□ 0.77
HLA-EP13747 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-EP13747 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-EP13747 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-EP13747 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-EP13747 CYP2D8P-201ENST00000433633 1490 ntBASIC19.84■□□□□ 0.77
HLA-EP13747 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
HLA-EP13747 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-EP13747 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-EP13747 TMEM179-206ENST00000616017 1645 ntBASIC19.84■□□□□ 0.77
HLA-EP13747 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-EP13747 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-EP13747 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-EP13747 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms