Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.55■□□□□ 0.08
PF4V1P10720 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.55■□□□□ 0.08
PF4V1P10720 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.55■□□□□ 0.08
PF4V1P10720 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.55■□□□□ 0.08
PF4V1P10720 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.55■□□□□ 0.08
PF4V1P10720 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.55■□□□□ 0.08
PF4V1P10720 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PF4V1P10720 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PF4V1P10720 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PF4V1P10720 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.55■□□□□ 0.08
PF4V1P10720 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PF4V1P10720 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 AC124283.5-201ENST00000624661 1809 ntBASIC15.54■□□□□ 0.08
PF4V1P10720 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 AL391422.3-201ENST00000603791 2761 ntBASIC15.54■□□□□ 0.08
PF4V1P10720 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.54■□□□□ 0.08
PF4V1P10720 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.54■□□□□ 0.08
PF4V1P10720 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.54■□□□□ 0.08
PF4V1P10720 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.54■□□□□ 0.08
PF4V1P10720 RPS2P55-201ENST00000397318 883 ntBASIC15.54■□□□□ 0.08
PF4V1P10720 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.54■□□□□ 0.08
PF4V1P10720 AC133681.1-201ENST00000465482 601 ntBASIC15.54■□□□□ 0.08
PF4V1P10720 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PF4V1P10720 AC107956.1-201ENST00000494359 873 ntBASIC15.54■□□□□ 0.08
PF4V1P10720 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.54■□□□□ 0.08
PF4V1P10720 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.54■□□□□ 0.08
PF4V1P10720 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.54■□□□□ 0.08
PF4V1P10720 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PF4V1P10720 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PF4V1P10720 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PF4V1P10720 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.54■□□□□ 0.08
PF4V1P10720 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.53■□□□□ 0.08
PF4V1P10720 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
PF4V1P10720 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.53■□□□□ 0.08
PF4V1P10720 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PF4V1P10720 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.53■□□□□ 0.08
PF4V1P10720 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.53■□□□□ 0.08
PF4V1P10720 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PF4V1P10720 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.53■□□□□ 0.08
PF4V1P10720 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.53■□□□□ 0.08
PF4V1P10720 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.53■□□□□ 0.08
PF4V1P10720 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.53■□□□□ 0.08
PF4V1P10720 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.53■□□□□ 0.08
PF4V1P10720 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PF4V1P10720 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.53■□□□□ 0.08
PF4V1P10720 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.53■□□□□ 0.08
PF4V1P10720 AC233702.5-201ENST00000584107 538 ntBASIC15.53■□□□□ 0.08
PF4V1P10720 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PF4V1P10720 AL121906.2-201ENST00000621597 723 ntBASIC15.53■□□□□ 0.08
PF4V1P10720 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.53■□□□□ 0.08
PF4V1P10720 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.53■□□□□ 0.08
PF4V1P10720 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PF4V1P10720 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PF4V1P10720 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.53■□□□□ 0.08
PF4V1P10720 BX119927.1-201ENST00000636596 1552 ntBASIC15.53■□□□□ 0.08
PF4V1P10720 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PF4V1P10720 BCL2-203ENST00000589955 5011 ntBASIC15.53■□□□□ 0.08
PF4V1P10720 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PF4V1P10720 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
PF4V1P10720 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PF4V1P10720 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
PF4V1P10720 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PF4V1P10720 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PF4V1P10720 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PF4V1P10720 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PF4V1P10720 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
PF4V1P10720 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.52■□□□□ 0.08
PF4V1P10720 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PF4V1P10720 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PF4V1P10720 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
PF4V1P10720 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PF4V1P10720 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.52■□□□□ 0.08
PF4V1P10720 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms