Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
CSB-PGBD3P0DP91 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
CSB-PGBD3P0DP91 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC26.11■■□□□ 1.77
CSB-PGBD3P0DP91 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.1■■□□□ 1.77
CSB-PGBD3P0DP91 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC26.1■■□□□ 1.77
CSB-PGBD3P0DP91 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC26.1■■□□□ 1.77
CSB-PGBD3P0DP91 AC006128.1-201ENST00000624704 1661 ntBASIC26.1■■□□□ 1.77
CSB-PGBD3P0DP91 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CSB-PGBD3P0DP91 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC26.1■■□□□ 1.77
CSB-PGBD3P0DP91 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC26.1■■□□□ 1.77
CSB-PGBD3P0DP91 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CSB-PGBD3P0DP91 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC26.1■■□□□ 1.77
CSB-PGBD3P0DP91 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CSB-PGBD3P0DP91 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CSB-PGBD3P0DP91 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC26.1■■□□□ 1.77
CSB-PGBD3P0DP91 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 AC092720.2-201ENST00000602388 1665 ntBASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 AC010653.2-201ENST00000623505 997 ntBASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 AC141257.4-201ENST00000634557 245 ntBASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 AC136944.6-201ENST00000634818 245 ntBASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSB-PGBD3P0DP91 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC26.08■■□□□ 1.77
CSB-PGBD3P0DP91 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC26.08■■□□□ 1.77
CSB-PGBD3P0DP91 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CSB-PGBD3P0DP91 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
CSB-PGBD3P0DP91 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC26.08■■□□□ 1.77
CSB-PGBD3P0DP91 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
CSB-PGBD3P0DP91 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CSB-PGBD3P0DP91 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC26.08■■□□□ 1.77
CSB-PGBD3P0DP91 AC011558.1-201ENST00000623459 338 ntBASIC26.08■■□□□ 1.77
CSB-PGBD3P0DP91 AP000550.4-202ENST00000639755 178 ntBASIC26.08■■□□□ 1.77
CSB-PGBD3P0DP91 AC007225.1-201ENST00000566331 1836 ntBASIC26.08■■□□□ 1.77
CSB-PGBD3P0DP91 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CSB-PGBD3P0DP91 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
CSB-PGBD3P0DP91 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CSB-PGBD3P0DP91 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CSB-PGBD3P0DP91 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CSB-PGBD3P0DP91 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
CSB-PGBD3P0DP91 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CSB-PGBD3P0DP91 CD320-202ENST00000537716 1119 ntTSL 2 BASIC26.07■■□□□ 1.76
CSB-PGBD3P0DP91 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC26.07■■□□□ 1.76
CSB-PGBD3P0DP91 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC26.07■■□□□ 1.76
CSB-PGBD3P0DP91 DBP-204ENST00000599385 709 ntTSL 3 BASIC26.07■■□□□ 1.76
CSB-PGBD3P0DP91 AL121894.2-201ENST00000602977 491 ntBASIC26.07■■□□□ 1.76
CSB-PGBD3P0DP91 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.07■■□□□ 1.76
CSB-PGBD3P0DP91 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
CSB-PGBD3P0DP91 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CSB-PGBD3P0DP91 AC092338.2-201ENST00000568827 1415 ntBASIC26.06■■□□□ 1.76
CSB-PGBD3P0DP91 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC26.06■■□□□ 1.76
CSB-PGBD3P0DP91 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC26.06■■□□□ 1.76
CSB-PGBD3P0DP91 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC26.06■■□□□ 1.76
CSB-PGBD3P0DP91 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC26.06■■□□□ 1.76
CSB-PGBD3P0DP91 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC26.06■■□□□ 1.76
CSB-PGBD3P0DP91 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CSB-PGBD3P0DP91 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CSB-PGBD3P0DP91 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CSB-PGBD3P0DP91 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CSB-PGBD3P0DP91 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
CSB-PGBD3P0DP91 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CSB-PGBD3P0DP91 ANKRD20A18P-201ENST00000359341 492 ntBASIC26.04■■□□□ 1.76
CSB-PGBD3P0DP91 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CSB-PGBD3P0DP91 PCED1CP-201ENST00000419887 785 ntBASIC26.04■■□□□ 1.76
CSB-PGBD3P0DP91 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CSB-PGBD3P0DP91 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
CSB-PGBD3P0DP91 Z85996.1-201ENST00000494644 937 ntBASIC26.04■■□□□ 1.76
CSB-PGBD3P0DP91 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC26.04■■□□□ 1.76
CSB-PGBD3P0DP91 TOLLIP-AS1-201ENST00000530897 939 ntBASIC26.04■■□□□ 1.76
CSB-PGBD3P0DP91 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CSB-PGBD3P0DP91 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.04■■□□□ 1.76
CSB-PGBD3P0DP91 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms