Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHGBP05060 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.67■■□□□ 1.38
CHGBP05060 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHGBP05060 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHGBP05060 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CHGBP05060 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CHGBP05060 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.66■■□□□ 1.38
CHGBP05060 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CHGBP05060 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHGBP05060 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CHGBP05060 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHGBP05060 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHGBP05060 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.66■■□□□ 1.38
CHGBP05060 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHGBP05060 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGBP05060 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGBP05060 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGBP05060 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGBP05060 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.65■■□□□ 1.38
CHGBP05060 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGBP05060 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGBP05060 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CHGBP05060 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.65■■□□□ 1.38
CHGBP05060 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGBP05060 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CHGBP05060 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGBP05060 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHGBP05060 LINC01465-201ENST00000408887 1940 ntBASIC23.65■■□□□ 1.38
CHGBP05060 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CHGBP05060 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.64■■□□□ 1.38
CHGBP05060 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
CHGBP05060 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHGBP05060 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.64■■□□□ 1.38
CHGBP05060 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHGBP05060 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHGBP05060 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
CHGBP05060 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CHGBP05060 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHGBP05060 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHGBP05060 KRT18P16-201ENST00000510337 1294 ntBASIC23.64■■□□□ 1.37
CHGBP05060 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CHGBP05060 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHGBP05060 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.64■■□□□ 1.37
CHGBP05060 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
CHGBP05060 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHGBP05060 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CHGBP05060 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHGBP05060 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHGBP05060 HTR7P1-201ENST00000538670 1336 ntBASIC23.63■■□□□ 1.37
CHGBP05060 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHGBP05060 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHGBP05060 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHGBP05060 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHGBP05060 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHGBP05060 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHGBP05060 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.63■■□□□ 1.37
CHGBP05060 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHGBP05060 KRT16P5-201ENST00000455284 522 ntBASIC23.63■■□□□ 1.37
CHGBP05060 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHGBP05060 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CHGBP05060 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.63■■□□□ 1.37
CHGBP05060 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHGBP05060 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.63■■□□□ 1.37
CHGBP05060 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHGBP05060 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
CHGBP05060 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.62■■□□□ 1.37
CHGBP05060 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CHGBP05060 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CHGBP05060 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHGBP05060 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHGBP05060 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
CHGBP05060 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHGBP05060 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
CHGBP05060 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.62■■□□□ 1.37
CHGBP05060 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.62■■□□□ 1.37
CHGBP05060 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.62■■□□□ 1.37
CHGBP05060 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.62■■□□□ 1.37
CHGBP05060 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.62■■□□□ 1.37
CHGBP05060 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHGBP05060 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CHGBP05060 TREX1-205ENST00000625293 1783 ntBASIC23.62■■□□□ 1.37
CHGBP05060 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHGBP05060 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CHGBP05060 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CHGBP05060 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHGBP05060 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHGBP05060 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHGBP05060 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
CHGBP05060 RPS2P55-201ENST00000397318 883 ntBASIC23.61■■□□□ 1.37
CHGBP05060 YBX1P10-201ENST00000444752 975 ntBASIC23.61■■□□□ 1.37
CHGBP05060 RPS2P4-201ENST00000476944 856 ntBASIC23.61■■□□□ 1.37
CHGBP05060 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHGBP05060 AC107956.1-201ENST00000494359 873 ntBASIC23.61■■□□□ 1.37
CHGBP05060 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.61■■□□□ 1.37
CHGBP05060 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHGBP05060 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHGBP05060 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.61■■□□□ 1.37
CHGBP05060 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms