Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRAP04437 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TCRAP04437 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRAP04437 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRAP04437 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TCRAP04437 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRAP04437 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 CROCCP3-202ENST00000420820 1947 ntBASIC14.93□□□□□ -0.02
TCRAP04437 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TCRAP04437 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TCRAP04437 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRAP04437 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRAP04437 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRAP04437 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
TCRAP04437 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TCRAP04437 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.92□□□□□ -0.02
TCRAP04437 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TCRAP04437 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
TCRAP04437 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TCRAP04437 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TCRAP04437 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.92□□□□□ -0.02
TCRAP04437 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.92□□□□□ -0.02
TCRAP04437 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.92□□□□□ -0.02
TCRAP04437 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.92□□□□□ -0.02
TCRAP04437 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.92□□□□□ -0.02
TCRAP04437 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TCRAP04437 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRAP04437 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
TCRAP04437 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.91□□□□□ -0.02
TCRAP04437 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.91□□□□□ -0.02
TCRAP04437 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRAP04437 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRAP04437 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TCRAP04437 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
TCRAP04437 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TCRAP04437 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TCRAP04437 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.91□□□□□ -0.02
TCRAP04437 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRAP04437 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.91□□□□□ -0.02
TCRAP04437 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.91□□□□□ -0.02
TCRAP04437 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.91□□□□□ -0.02
TCRAP04437 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
TCRAP04437 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TCRAP04437 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
TCRAP04437 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TCRAP04437 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRAP04437 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TCRAP04437 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TCRAP04437 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TCRAP04437 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRAP04437 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRAP04437 AC026471.1-201ENST00000564629 3026 ntBASIC14.9□□□□□ -0.02
TCRAP04437 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRAP04437 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRAP04437 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRAP04437 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRAP04437 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRAP04437 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRAP04437 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.9□□□□□ -0.02
TCRAP04437 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRAP04437 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRAP04437 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRAP04437 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms