Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-ND3P03897 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.95■□□□□ 0.78
MT-ND3P03897 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.95■□□□□ 0.78
MT-ND3P03897 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.95■□□□□ 0.78
MT-ND3P03897 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.95■□□□□ 0.78
MT-ND3P03897 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.95■□□□□ 0.78
MT-ND3P03897 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.95■□□□□ 0.78
MT-ND3P03897 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.95■□□□□ 0.78
MT-ND3P03897 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.95■□□□□ 0.78
MT-ND3P03897 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.95■□□□□ 0.78
MT-ND3P03897 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.95■□□□□ 0.78
MT-ND3P03897 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.95■□□□□ 0.78
MT-ND3P03897 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.95■□□□□ 0.78
MT-ND3P03897 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.95■□□□□ 0.78
MT-ND3P03897 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 MKRN4P-201ENST00000444706 1521 ntBASIC19.95■□□□□ 0.78
MT-ND3P03897 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
MT-ND3P03897 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
MT-ND3P03897 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
MT-ND3P03897 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.95■□□□□ 0.78
MT-ND3P03897 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-ND3P03897 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.94■□□□□ 0.78
MT-ND3P03897 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.94■□□□□ 0.78
MT-ND3P03897 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND3P03897 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND3P03897 AC087633.2-202ENST00000565166 1439 ntBASIC19.94■□□□□ 0.78
MT-ND3P03897 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND3P03897 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND3P03897 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND3P03897 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
MT-ND3P03897 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.94■□□□□ 0.78
MT-ND3P03897 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.94■□□□□ 0.78
MT-ND3P03897 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND3P03897 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND3P03897 AL162412.1-201ENST00000567129 965 ntBASIC19.94■□□□□ 0.78
MT-ND3P03897 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND3P03897 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND3P03897 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.94■□□□□ 0.78
MT-ND3P03897 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND3P03897 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.94■□□□□ 0.78
MT-ND3P03897 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MT-ND3P03897 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
MT-ND3P03897 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
MT-ND3P03897 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.93■□□□□ 0.78
MT-ND3P03897 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
MT-ND3P03897 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.93■□□□□ 0.78
MT-ND3P03897 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.93■□□□□ 0.78
MT-ND3P03897 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.93■□□□□ 0.78
MT-ND3P03897 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.93■□□□□ 0.78
MT-ND3P03897 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.93■□□□□ 0.78
MT-ND3P03897 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
MT-ND3P03897 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.93■□□□□ 0.78
MT-ND3P03897 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MT-ND3P03897 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
MT-ND3P03897 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND3P03897 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MT-ND3P03897 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.92■□□□□ 0.78
MT-ND3P03897 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND3P03897 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.92■□□□□ 0.78
MT-ND3P03897 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.92■□□□□ 0.78
MT-ND3P03897 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND3P03897 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND3P03897 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MT-ND3P03897 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND3P03897 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.92■□□□□ 0.78
MT-ND3P03897 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
MT-ND3P03897 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND3P03897 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND3P03897 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.92■□□□□ 0.78
MT-ND3P03897 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.92■□□□□ 0.78
MT-ND3P03897 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.92■□□□□ 0.78
MT-ND3P03897 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND3P03897 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-ND3P03897 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.92■□□□□ 0.78
MT-ND3P03897 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.91■□□□□ 0.78
MT-ND3P03897 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms