Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DQA2P01906 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA2P01906 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA2P01906 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA2P01906 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA2P01906 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DQA2P01906 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DQA2P01906 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HLA-DQA2P01906 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DQA2P01906 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 LSM12P1-201ENST00000411836 588 ntBASIC17.61■□□□□ 0.41
HLA-DQA2P01906 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 AC004911.1-201ENST00000416316 871 ntBASIC17.61■□□□□ 0.41
HLA-DQA2P01906 AC093787.1-201ENST00000450396 207 ntBASIC17.61■□□□□ 0.41
HLA-DQA2P01906 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 C2orf69P4-201ENST00000565394 541 ntBASIC17.61■□□□□ 0.41
HLA-DQA2P01906 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 AC009237.14-201ENST00000609975 1594 ntBASIC17.61■□□□□ 0.41
HLA-DQA2P01906 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DQA2P01906 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 KRT17P1-201ENST00000399211 1546 ntBASIC17.6■□□□□ 0.41
HLA-DQA2P01906 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DQA2P01906 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 AP001271.2-201ENST00000624018 1556 ntBASIC17.59■□□□□ 0.41
HLA-DQA2P01906 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 AL512625.2-201ENST00000417533 625 ntBASIC17.59■□□□□ 0.41
HLA-DQA2P01906 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DQA2P01906 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.58■□□□□ 0.41
HLA-DQA2P01906 TREX1-205ENST00000625293 1783 ntBASIC17.58■□□□□ 0.41
HLA-DQA2P01906 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.58■□□□□ 0.41
HLA-DQA2P01906 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms