Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX6O95475 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX6O95475 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX6O95475 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX6O95475 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX6O95475 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.42■□□□□ 0.22
SIX6O95475 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.42■□□□□ 0.22
SIX6O95475 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
SIX6O95475 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.42■□□□□ 0.22
SIX6O95475 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.42■□□□□ 0.22
SIX6O95475 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX6O95475 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.42■□□□□ 0.22
SIX6O95475 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIX6O95475 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.42■□□□□ 0.22
SIX6O95475 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIX6O95475 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.42■□□□□ 0.22
SIX6O95475 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SIX6O95475 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIX6O95475 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.42■□□□□ 0.22
SIX6O95475 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.42■□□□□ 0.22
SIX6O95475 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX6O95475 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX6O95475 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.41■□□□□ 0.22
SIX6O95475 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.41■□□□□ 0.22
SIX6O95475 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX6O95475 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
SIX6O95475 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.41■□□□□ 0.22
SIX6O95475 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX6O95475 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX6O95475 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SIX6O95475 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX6O95475 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX6O95475 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.41■□□□□ 0.22
SIX6O95475 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
SIX6O95475 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.41■□□□□ 0.22
SIX6O95475 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX6O95475 SERBP1P1-201ENST00000396021 1160 ntBASIC16.41■□□□□ 0.22
SIX6O95475 EEF1DP3-203ENST00000566025 782 ntBASIC16.41■□□□□ 0.22
SIX6O95475 AC053503.5-201ENST00000601508 636 ntBASIC16.41■□□□□ 0.22
SIX6O95475 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.41■□□□□ 0.22
SIX6O95475 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.41■□□□□ 0.22
SIX6O95475 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.41■□□□□ 0.22
SIX6O95475 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.41■□□□□ 0.22
SIX6O95475 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIX6O95475 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SIX6O95475 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX6O95475 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SIX6O95475 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX6O95475 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.41■□□□□ 0.22
SIX6O95475 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.41■□□□□ 0.22
SIX6O95475 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIX6O95475 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.4■□□□□ 0.22
SIX6O95475 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.4■□□□□ 0.22
SIX6O95475 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.4■□□□□ 0.22
SIX6O95475 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 AL354751.1-201ENST00000412768 1863 ntBASIC16.4■□□□□ 0.22
SIX6O95475 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 SRD5A1P1-201ENST00000442297 786 ntBASIC16.4■□□□□ 0.22
SIX6O95475 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 AC116050.2-201ENST00000612102 1779 ntBASIC16.4■□□□□ 0.22
SIX6O95475 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.4■□□□□ 0.22
SIX6O95475 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SIX6O95475 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIX6O95475 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
SIX6O95475 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.39■□□□□ 0.22
SIX6O95475 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SIX6O95475 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SIX6O95475 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SIX6O95475 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIX6O95475 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms