Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HCN1O60741 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.31■□□□□ 0.52
HCN1O60741 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.31■□□□□ 0.52
HCN1O60741 RPS2P52-201ENST00000469610 820 ntBASIC18.31■□□□□ 0.52
HCN1O60741 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.31■□□□□ 0.52
HCN1O60741 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.31■□□□□ 0.52
HCN1O60741 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.31■□□□□ 0.52
HCN1O60741 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.31■□□□□ 0.52
HCN1O60741 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HCN1O60741 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HCN1O60741 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 DPP3P2-201ENST00000416030 1696 ntBASIC18.31■□□□□ 0.52
HCN1O60741 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCN1O60741 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HCN1O60741 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCN1O60741 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.3■□□□□ 0.52
HCN1O60741 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
HCN1O60741 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCN1O60741 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCN1O60741 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.3■□□□□ 0.52
HCN1O60741 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCN1O60741 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.3■□□□□ 0.52
HCN1O60741 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
HCN1O60741 AL390719.1-204ENST00000412397 1219 ntBASIC18.3■□□□□ 0.52
HCN1O60741 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.3■□□□□ 0.52
HCN1O60741 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
HCN1O60741 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.3■□□□□ 0.52
HCN1O60741 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HCN1O60741 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.3■□□□□ 0.52
HCN1O60741 AC005829.2-201ENST00000571422 1056 ntBASIC18.3■□□□□ 0.52
HCN1O60741 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.3■□□□□ 0.52
HCN1O60741 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.3■□□□□ 0.52
HCN1O60741 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCN1O60741 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.3■□□□□ 0.52
HCN1O60741 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCN1O60741 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCN1O60741 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HCN1O60741 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HCN1O60741 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.29■□□□□ 0.52
HCN1O60741 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.29■□□□□ 0.52
HCN1O60741 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HCN1O60741 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.29■□□□□ 0.52
HCN1O60741 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCN1O60741 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCN1O60741 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCN1O60741 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HCN1O60741 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HCN1O60741 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCN1O60741 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.29■□□□□ 0.52
HCN1O60741 POM121L13P-201ENST00000422362 380 ntBASIC18.29■□□□□ 0.52
HCN1O60741 AL158047.1-201ENST00000445918 881 ntBASIC18.29■□□□□ 0.52
HCN1O60741 AC093827.2-201ENST00000512654 315 ntBASIC18.29■□□□□ 0.52
HCN1O60741 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.29■□□□□ 0.52
HCN1O60741 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.29■□□□□ 0.52
HCN1O60741 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HCN1O60741 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.29■□□□□ 0.52
HCN1O60741 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.29■□□□□ 0.52
HCN1O60741 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HCN1O60741 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCN1O60741 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.29■□□□□ 0.52
HCN1O60741 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCN1O60741 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.29■□□□□ 0.52
HCN1O60741 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HCN1O60741 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HCN1O60741 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
HCN1O60741 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
HCN1O60741 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HCN1O60741 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HCN1O60741 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HCN1O60741 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.28■□□□□ 0.52
HCN1O60741 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HCN1O60741 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.28■□□□□ 0.52
HCN1O60741 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.28■□□□□ 0.52
HCN1O60741 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCN1O60741 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HCN1O60741 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCN1O60741 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.27■□□□□ 0.52
HCN1O60741 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HCN1O60741 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms