Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.32■■□□□ 1.16
CCNT1O60563 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCNT1O60563 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
CCNT1O60563 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CCNT1O60563 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.31■■□□□ 1.16
CCNT1O60563 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.31■■□□□ 1.16
CCNT1O60563 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CCNT1O60563 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNT1O60563 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.31■■□□□ 1.16
CCNT1O60563 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNT1O60563 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CCNT1O60563 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNT1O60563 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CCNT1O60563 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.31■■□□□ 1.16
CCNT1O60563 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNT1O60563 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNT1O60563 NBPF21P-201ENST00000425093 1451 ntBASIC22.31■■□□□ 1.16
CCNT1O60563 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CCNT1O60563 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CCNT1O60563 KRASP1-201ENST00000407852 552 ntBASIC22.31■■□□□ 1.16
CCNT1O60563 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.31■■□□□ 1.16
CCNT1O60563 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CCNT1O60563 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.31■■□□□ 1.16
CCNT1O60563 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.31■■□□□ 1.16
CCNT1O60563 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.31■■□□□ 1.16
CCNT1O60563 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CCNT1O60563 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.31■■□□□ 1.16
CCNT1O60563 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNT1O60563 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CCNT1O60563 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNT1O60563 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.3■■□□□ 1.16
CCNT1O60563 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNT1O60563 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CCNT1O60563 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.3■■□□□ 1.16
CCNT1O60563 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNT1O60563 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.3■■□□□ 1.16
CCNT1O60563 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.3■■□□□ 1.16
CCNT1O60563 YBX1P10-201ENST00000444752 975 ntBASIC22.3■■□□□ 1.16
CCNT1O60563 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.3■■□□□ 1.16
CCNT1O60563 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
CCNT1O60563 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.3■■□□□ 1.16
CCNT1O60563 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.3■■□□□ 1.16
CCNT1O60563 AC124016.1-201ENST00000609552 612 ntBASIC22.3■■□□□ 1.16
CCNT1O60563 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.3■■□□□ 1.16
CCNT1O60563 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNT1O60563 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNT1O60563 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
CCNT1O60563 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.3■■□□□ 1.16
CCNT1O60563 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNT1O60563 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.3■■□□□ 1.16
CCNT1O60563 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CCNT1O60563 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCNT1O60563 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 AL158211.5-201ENST00000623583 2518 ntBASIC22.29■■□□□ 1.16
CCNT1O60563 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
CCNT1O60563 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
CCNT1O60563 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CCNT1O60563 RPPH1-201ENST00000516869 333 ntBASIC22.29■■□□□ 1.16
CCNT1O60563 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.29■■□□□ 1.16
CCNT1O60563 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.29■■□□□ 1.16
CCNT1O60563 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
CCNT1O60563 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CCNT1O60563 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.29■■□□□ 1.16
CCNT1O60563 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNT1O60563 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.29■■□□□ 1.16
CCNT1O60563 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CCNT1O60563 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CCNT1O60563 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.28■■□□□ 1.16
CCNT1O60563 AC098590.1-201ENST00000468126 897 ntBASIC22.28■■□□□ 1.16
CCNT1O60563 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CCNT1O60563 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCNT1O60563 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.28■■□□□ 1.16
CCNT1O60563 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.28■■□□□ 1.16
CCNT1O60563 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CCNT1O60563 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms