Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.07■□□□□ 0.8
SYNCRIPO60506 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNCRIPO60506 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.07■□□□□ 0.8
SYNCRIPO60506 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNCRIPO60506 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.07■□□□□ 0.8
SYNCRIPO60506 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNCRIPO60506 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SYNCRIPO60506 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.07■□□□□ 0.8
SYNCRIPO60506 AC092720.2-201ENST00000602388 1665 ntBASIC20.07■□□□□ 0.8
SYNCRIPO60506 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCRIPO60506 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.06■□□□□ 0.8
SYNCRIPO60506 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCRIPO60506 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCRIPO60506 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.06■□□□□ 0.8
SYNCRIPO60506 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SYNCRIPO60506 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SYNCRIPO60506 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.06■□□□□ 0.8
SYNCRIPO60506 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCRIPO60506 FAM210CP-201ENST00000445714 574 ntBASIC20.06■□□□□ 0.8
SYNCRIPO60506 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCRIPO60506 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.06■□□□□ 0.8
SYNCRIPO60506 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.06■□□□□ 0.8
SYNCRIPO60506 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCRIPO60506 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
SYNCRIPO60506 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SYNCRIPO60506 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.06■□□□□ 0.8
SYNCRIPO60506 AL353708.3-201ENST00000610272 989 ntBASIC20.06■□□□□ 0.8
SYNCRIPO60506 AP006587.1-201ENST00000534129 1502 ntBASIC20.06■□□□□ 0.8
SYNCRIPO60506 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCRIPO60506 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCRIPO60506 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 GABARAPL3-202ENST00000624044 1851 ntBASIC20.05■□□□□ 0.8
SYNCRIPO60506 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.05■□□□□ 0.8
SYNCRIPO60506 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.05■□□□□ 0.8
SYNCRIPO60506 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.05■□□□□ 0.8
SYNCRIPO60506 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.05■□□□□ 0.8
SYNCRIPO60506 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SYNCRIPO60506 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCRIPO60506 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCRIPO60506 AP005212.1-201ENST00000581547 1997 ntBASIC20.04■□□□□ 0.8
SYNCRIPO60506 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCRIPO60506 AC073314.1-201ENST00000568729 2216 ntBASIC20.04■□□□□ 0.8
SYNCRIPO60506 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.04■□□□□ 0.8
SYNCRIPO60506 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SYNCRIPO60506 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCRIPO60506 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCRIPO60506 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCRIPO60506 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCRIPO60506 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCRIPO60506 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.04■□□□□ 0.8
SYNCRIPO60506 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCRIPO60506 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.04■□□□□ 0.8
SYNCRIPO60506 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.04■□□□□ 0.8
SYNCRIPO60506 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCRIPO60506 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SYNCRIPO60506 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCRIPO60506 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SYNCRIPO60506 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCRIPO60506 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SYNCRIPO60506 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNCRIPO60506 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNCRIPO60506 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNCRIPO60506 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNCRIPO60506 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SYNCRIPO60506 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.03■□□□□ 0.8
SYNCRIPO60506 CR392000.1-201ENST00000624770 1228 ntBASIC20.03■□□□□ 0.8
SYNCRIPO60506 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.03■□□□□ 0.8
SYNCRIPO60506 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNCRIPO60506 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNCRIPO60506 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNCRIPO60506 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.03■□□□□ 0.8
SYNCRIPO60506 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNCRIPO60506 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNCRIPO60506 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
SYNCRIPO60506 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNCRIPO60506 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNCRIPO60506 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SYNCRIPO60506 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNCRIPO60506 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SYNCRIPO60506 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYNCRIPO60506 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.02■□□□□ 0.8
SYNCRIPO60506 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYNCRIPO60506 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.02■□□□□ 0.8
SYNCRIPO60506 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNCRIPO60506 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms