Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COCHO43405 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
COCHO43405 AC009237.14-201ENST00000609975 1594 ntBASIC20.34■□□□□ 0.85
COCHO43405 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COCHO43405 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COCHO43405 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COCHO43405 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
COCHO43405 MMP23A-201ENST00000234610 1017 ntBASIC20.33■□□□□ 0.85
COCHO43405 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
COCHO43405 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.33■□□□□ 0.85
COCHO43405 MESTP1-201ENST00000404287 994 ntBASIC20.33■□□□□ 0.85
COCHO43405 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
COCHO43405 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COCHO43405 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.33■□□□□ 0.85
COCHO43405 AC026271.3-201ENST00000571884 352 ntBASIC20.33■□□□□ 0.85
COCHO43405 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.33■□□□□ 0.85
COCHO43405 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.33■□□□□ 0.85
COCHO43405 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.33■□□□□ 0.85
COCHO43405 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
COCHO43405 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COCHO43405 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COCHO43405 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
COCHO43405 KRT8P8-201ENST00000434750 1448 ntBASIC20.33■□□□□ 0.84
COCHO43405 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
COCHO43405 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COCHO43405 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
COCHO43405 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
COCHO43405 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.32■□□□□ 0.84
COCHO43405 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
COCHO43405 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COCHO43405 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COCHO43405 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
COCHO43405 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COCHO43405 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.32■□□□□ 0.84
COCHO43405 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.32■□□□□ 0.84
COCHO43405 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COCHO43405 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COCHO43405 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COCHO43405 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.32■□□□□ 0.84
COCHO43405 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COCHO43405 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COCHO43405 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.32■□□□□ 0.84
COCHO43405 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.32■□□□□ 0.84
COCHO43405 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
COCHO43405 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.32■□□□□ 0.84
COCHO43405 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
COCHO43405 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COCHO43405 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COCHO43405 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COCHO43405 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COCHO43405 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.31■□□□□ 0.84
COCHO43405 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COCHO43405 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COCHO43405 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COCHO43405 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.31■□□□□ 0.84
COCHO43405 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
COCHO43405 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.31■□□□□ 0.84
COCHO43405 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COCHO43405 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COCHO43405 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COCHO43405 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.31■□□□□ 0.84
COCHO43405 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.31■□□□□ 0.84
COCHO43405 AC131212.4-201ENST00000623606 975 ntBASIC20.31■□□□□ 0.84
COCHO43405 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
COCHO43405 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.31■□□□□ 0.84
COCHO43405 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.3■□□□□ 0.84
COCHO43405 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COCHO43405 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COCHO43405 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COCHO43405 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COCHO43405 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COCHO43405 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COCHO43405 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COCHO43405 KRT8P9-201ENST00000558927 1449 ntBASIC20.3■□□□□ 0.84
COCHO43405 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COCHO43405 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COCHO43405 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
COCHO43405 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.3■□□□□ 0.84
COCHO43405 MIR1238-201ENST00000408483 83 ntBASIC20.3■□□□□ 0.84
COCHO43405 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.3■□□□□ 0.84
COCHO43405 AC012306.2-201ENST00000609350 630 ntBASIC20.3■□□□□ 0.84
COCHO43405 MIR6786-201ENST00000616843 113 ntBASIC20.3■□□□□ 0.84
COCHO43405 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COCHO43405 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COCHO43405 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COCHO43405 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.3■□□□□ 0.84
COCHO43405 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COCHO43405 FSCN1P1-201ENST00000568912 1481 ntBASIC20.3■□□□□ 0.84
COCHO43405 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.29■□□□□ 0.84
COCHO43405 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.29■□□□□ 0.84
COCHO43405 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COCHO43405 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COCHO43405 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COCHO43405 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COCHO43405 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COCHO43405 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COCHO43405 AL390955.1-201ENST00000428694 934 ntBASIC20.29■□□□□ 0.84
COCHO43405 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COCHO43405 B3GAT3P1-201ENST00000471720 806 ntBASIC20.29■□□□□ 0.84
COCHO43405 AC011506.1-201ENST00000474329 610 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms