Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXA2O43364 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
HOXA2O43364 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOXA2O43364 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.07■□□□□ 0.96
HOXA2O43364 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
HOXA2O43364 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA2O43364 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA2O43364 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA2O43364 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.06■□□□□ 0.96
HOXA2O43364 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA2O43364 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
HOXA2O43364 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
HOXA2O43364 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.06■□□□□ 0.96
HOXA2O43364 BX664615.1-201ENST00000443558 458 ntBASIC21.06■□□□□ 0.96
HOXA2O43364 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.06■□□□□ 0.96
HOXA2O43364 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA2O43364 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA2O43364 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HOXA2O43364 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.06■□□□□ 0.96
HOXA2O43364 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA2O43364 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA2O43364 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.06■□□□□ 0.96
HOXA2O43364 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOXA2O43364 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.06■□□□□ 0.96
HOXA2O43364 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA2O43364 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
HOXA2O43364 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXA2O43364 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA2O43364 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA2O43364 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA2O43364 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA2O43364 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXA2O43364 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA2O43364 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.05■□□□□ 0.96
HOXA2O43364 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXA2O43364 LINC01238-205ENST00000567549 1107 ntBASIC21.05■□□□□ 0.96
HOXA2O43364 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
HOXA2O43364 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXA2O43364 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXA2O43364 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA2O43364 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
HOXA2O43364 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA2O43364 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.04■□□□□ 0.96
HOXA2O43364 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA2O43364 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA2O43364 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HOXA2O43364 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA2O43364 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HOXA2O43364 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA2O43364 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA2O43364 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA2O43364 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.04■□□□□ 0.96
HOXA2O43364 AC008040.2-201ENST00000461049 708 ntBASIC21.04■□□□□ 0.96
HOXA2O43364 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA2O43364 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.04■□□□□ 0.96
HOXA2O43364 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA2O43364 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA2O43364 NTF6B-201ENST00000591913 560 ntBASIC21.04■□□□□ 0.96
HOXA2O43364 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA2O43364 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
HOXA2O43364 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA2O43364 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA2O43364 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA2O43364 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA2O43364 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HOXA2O43364 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
HOXA2O43364 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA2O43364 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA2O43364 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXA2O43364 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA2O43364 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
HOXA2O43364 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA2O43364 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA2O43364 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.03■□□□□ 0.96
HOXA2O43364 AC091390.4-202ENST00000476426 537 ntBASIC21.03■□□□□ 0.96
HOXA2O43364 Z85996.1-201ENST00000494644 937 ntBASIC21.03■□□□□ 0.96
HOXA2O43364 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
HOXA2O43364 AC006011.2-201ENST00000621313 1158 ntBASIC21.03■□□□□ 0.96
HOXA2O43364 AC010653.2-201ENST00000623505 997 ntBASIC21.03■□□□□ 0.96
HOXA2O43364 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA2O43364 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
HOXA2O43364 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA2O43364 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA2O43364 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA2O43364 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA2O43364 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA2O43364 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA2O43364 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA2O43364 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA2O43364 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA2O43364 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HOXA2O43364 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA2O43364 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.02■□□□□ 0.96
HOXA2O43364 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA2O43364 AL160286.2-201ENST00000567150 934 ntBASIC21.02■□□□□ 0.96
HOXA2O43364 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HOXA2O43364 AC087388.1-201ENST00000571370 1112 ntBASIC21.02■□□□□ 0.96
HOXA2O43364 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.02■□□□□ 0.96
HOXA2O43364 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.02■□□□□ 0.96
HOXA2O43364 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms