Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK2O43353 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK2O43353 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK2O43353 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.95■□□□□ 0.78
RIPK2O43353 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RIPK2O43353 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK2O43353 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK2O43353 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK2O43353 AC009113.1-201ENST00000570267 2443 ntBASIC19.94■□□□□ 0.78
RIPK2O43353 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.94■□□□□ 0.78
RIPK2O43353 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.94■□□□□ 0.78
RIPK2O43353 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK2O43353 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK2O43353 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK2O43353 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK2O43353 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.94■□□□□ 0.78
RIPK2O43353 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK2O43353 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RIPK2O43353 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.94■□□□□ 0.78
RIPK2O43353 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.94■□□□□ 0.78
RIPK2O43353 AL162412.1-201ENST00000567129 965 ntBASIC19.94■□□□□ 0.78
RIPK2O43353 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK2O43353 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK2O43353 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK2O43353 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RIPK2O43353 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK2O43353 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RIPK2O43353 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RIPK2O43353 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK2O43353 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK2O43353 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK2O43353 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.93■□□□□ 0.78
RIPK2O43353 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK2O43353 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.93■□□□□ 0.78
RIPK2O43353 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK2O43353 HLA-G-202ENST00000376815 851 ntBASIC19.93■□□□□ 0.78
RIPK2O43353 HLA-G-203ENST00000376818 1127 ntBASIC19.93■□□□□ 0.78
RIPK2O43353 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.93■□□□□ 0.78
RIPK2O43353 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.93■□□□□ 0.78
RIPK2O43353 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.93■□□□□ 0.78
RIPK2O43353 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.93■□□□□ 0.78
RIPK2O43353 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK2O43353 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RIPK2O43353 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RIPK2O43353 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.93■□□□□ 0.78
RIPK2O43353 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.92■□□□□ 0.78
RIPK2O43353 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RIPK2O43353 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RIPK2O43353 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.92■□□□□ 0.78
RIPK2O43353 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 AC010536.3-201ENST00000620306 533 ntBASIC19.92■□□□□ 0.78
RIPK2O43353 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
RIPK2O43353 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK2O43353 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RIPK2O43353 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.91■□□□□ 0.78
RIPK2O43353 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.91■□□□□ 0.78
RIPK2O43353 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.91■□□□□ 0.78
RIPK2O43353 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RIPK2O43353 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.91■□□□□ 0.78
RIPK2O43353 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.91■□□□□ 0.78
RIPK2O43353 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RIPK2O43353 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.91■□□□□ 0.78
RIPK2O43353 AC105020.6-201ENST00000621523 1217 ntBASIC19.91■□□□□ 0.78
RIPK2O43353 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.91■□□□□ 0.78
RIPK2O43353 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.91■□□□□ 0.78
RIPK2O43353 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RIPK2O43353 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.91■□□□□ 0.78
RIPK2O43353 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 TEX21P-204ENST00000641479 1693 ntBASIC19.91■□□□□ 0.78
RIPK2O43353 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK2O43353 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK2O43353 AC141586.3-201ENST00000562166 1838 ntBASIC19.9■□□□□ 0.78
RIPK2O43353 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RIPK2O43353 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RIPK2O43353 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK2O43353 MCRIP2P1-201ENST00000394346 511 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms