Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MSI1O43347 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
MSI1O43347 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
MSI1O43347 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MSI1O43347 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MSI1O43347 RPS2P55-201ENST00000397318 883 ntBASIC20.42■□□□□ 0.86
MSI1O43347 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MSI1O43347 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MSI1O43347 AC107956.1-201ENST00000494359 873 ntBASIC20.42■□□□□ 0.86
MSI1O43347 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MSI1O43347 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.42■□□□□ 0.86
MSI1O43347 RARRES2P10-201ENST00000564312 460 ntBASIC20.42■□□□□ 0.86
MSI1O43347 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MSI1O43347 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MSI1O43347 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MSI1O43347 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
MSI1O43347 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
MSI1O43347 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MSI1O43347 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MSI1O43347 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MSI1O43347 AC009237.14-201ENST00000609975 1594 ntBASIC20.42■□□□□ 0.86
MSI1O43347 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.42■□□□□ 0.86
MSI1O43347 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MSI1O43347 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.41■□□□□ 0.86
MSI1O43347 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.41■□□□□ 0.86
MSI1O43347 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSI1O43347 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.41■□□□□ 0.86
MSI1O43347 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSI1O43347 AC073130.3-201ENST00000624389 2278 ntBASIC20.41■□□□□ 0.86
MSI1O43347 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSI1O43347 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.41■□□□□ 0.86
MSI1O43347 AL596275.1-201ENST00000423464 877 ntBASIC20.41■□□□□ 0.86
MSI1O43347 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.41■□□□□ 0.86
MSI1O43347 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.41■□□□□ 0.86
MSI1O43347 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSI1O43347 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSI1O43347 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSI1O43347 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
MSI1O43347 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSI1O43347 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.41■□□□□ 0.86
MSI1O43347 TMEM179-206ENST00000616017 1645 ntBASIC20.41■□□□□ 0.86
MSI1O43347 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSI1O43347 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
MSI1O43347 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MSI1O43347 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSI1O43347 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MSI1O43347 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MSI1O43347 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.41■□□□□ 0.86
MSI1O43347 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
MSI1O43347 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MSI1O43347 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
MSI1O43347 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
MSI1O43347 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MSI1O43347 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
MSI1O43347 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
MSI1O43347 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MSI1O43347 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MSI1O43347 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MSI1O43347 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
MSI1O43347 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.4■□□□□ 0.86
MSI1O43347 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
MSI1O43347 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
MSI1O43347 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
MSI1O43347 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MSI1O43347 MIR718-201ENST00000390190 70 ntBASIC20.4■□□□□ 0.86
MSI1O43347 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MSI1O43347 AC012618.2-201ENST00000428058 849 ntBASIC20.4■□□□□ 0.86
MSI1O43347 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MSI1O43347 KRT18P16-201ENST00000510337 1294 ntBASIC20.4■□□□□ 0.86
MSI1O43347 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MSI1O43347 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.4■□□□□ 0.86
MSI1O43347 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
MSI1O43347 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
MSI1O43347 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.4■□□□□ 0.86
MSI1O43347 AC233702.5-201ENST00000584107 538 ntBASIC20.4■□□□□ 0.86
MSI1O43347 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MSI1O43347 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MSI1O43347 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.4■□□□□ 0.86
MSI1O43347 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
MSI1O43347 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MSI1O43347 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MSI1O43347 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.39■□□□□ 0.86
MSI1O43347 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
MSI1O43347 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MSI1O43347 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MSI1O43347 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MSI1O43347 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MSI1O43347 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.39■□□□□ 0.85
MSI1O43347 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MSI1O43347 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MSI1O43347 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.39■□□□□ 0.85
MSI1O43347 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.39■□□□□ 0.85
MSI1O43347 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MSI1O43347 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.39■□□□□ 0.85
MSI1O43347 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.39■□□□□ 0.85
MSI1O43347 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.39■□□□□ 0.85
MSI1O43347 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.39■□□□□ 0.85
MSI1O43347 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.39■□□□□ 0.85
MSI1O43347 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MSI1O43347 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms