Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF223E7ERA6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.31■□□□□ 0.2
RNF223E7ERA6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.31■□□□□ 0.2
RNF223E7ERA6 AC091390.4-202ENST00000476426 537 ntBASIC16.31■□□□□ 0.2
RNF223E7ERA6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 KRT18P56-201ENST00000507275 550 ntBASIC16.31■□□□□ 0.2
RNF223E7ERA6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF223E7ERA6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 PLK5-205ENST00000642079 1969 ntBASIC16.31■□□□□ 0.2
RNF223E7ERA6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF223E7ERA6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF223E7ERA6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF223E7ERA6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF223E7ERA6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF223E7ERA6 AL031133.1-201ENST00000406807 723 ntBASIC16.3■□□□□ 0.2
RNF223E7ERA6 FAM8A6P-201ENST00000407496 1135 ntBASIC16.3■□□□□ 0.2
RNF223E7ERA6 AC004951.3-201ENST00000418645 1148 ntBASIC16.3■□□□□ 0.2
RNF223E7ERA6 FAM207BP-201ENST00000447172 505 ntBASIC16.3■□□□□ 0.2
RNF223E7ERA6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF223E7ERA6 YBX1P2-201ENST00000489612 999 ntBASIC16.3■□□□□ 0.2
RNF223E7ERA6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.3■□□□□ 0.2
RNF223E7ERA6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF223E7ERA6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RNF223E7ERA6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF223E7ERA6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RNF223E7ERA6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF223E7ERA6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF223E7ERA6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF223E7ERA6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF223E7ERA6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF223E7ERA6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF223E7ERA6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF223E7ERA6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF223E7ERA6 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF223E7ERA6 LST1-206ENST00000376090 689 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF223E7ERA6 LST1-209ENST00000376096 565 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 LST1-210ENST00000376099 610 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF223E7ERA6 LST1-214ENST00000418507 726 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 TSPY5P-201ENST00000426936 936 ntBASIC16.29■□□□□ 0.2
RNF223E7ERA6 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF223E7ERA6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF223E7ERA6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 AC008040.2-201ENST00000461049 708 ntBASIC16.29■□□□□ 0.2
RNF223E7ERA6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF223E7ERA6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 AL138966.2-201ENST00000621997 464 ntBASIC16.29■□□□□ 0.2
RNF223E7ERA6 MYC-208ENST00000641036 567 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms