Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP99D6REC4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP99D6REC4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP99D6REC4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CFAP99D6REC4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CFAP99D6REC4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP99D6REC4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP99D6REC4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP99D6REC4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP99D6REC4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP99D6REC4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.55■□□□□ 0.72
CFAP99D6REC4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.55■□□□□ 0.72
CFAP99D6REC4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CFAP99D6REC4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.55■□□□□ 0.72
CFAP99D6REC4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CFAP99D6REC4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.55■□□□□ 0.72
CFAP99D6REC4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.55■□□□□ 0.72
CFAP99D6REC4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CFAP99D6REC4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.55■□□□□ 0.72
CFAP99D6REC4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 MIR4651-201ENST00000582622 73 ntBASIC19.55■□□□□ 0.72
CFAP99D6REC4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CFAP99D6REC4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.55■□□□□ 0.72
CFAP99D6REC4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP99D6REC4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CFAP99D6REC4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP99D6REC4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CFAP99D6REC4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP99D6REC4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.54■□□□□ 0.72
CFAP99D6REC4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP99D6REC4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CFAP99D6REC4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP99D6REC4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP99D6REC4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CFAP99D6REC4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP99D6REC4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.54■□□□□ 0.72
CFAP99D6REC4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP99D6REC4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP99D6REC4 AC006058.3-201ENST00000606217 1069 ntBASIC19.54■□□□□ 0.72
CFAP99D6REC4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.54■□□□□ 0.72
CFAP99D6REC4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.54■□□□□ 0.72
CFAP99D6REC4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CFAP99D6REC4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP99D6REC4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.54■□□□□ 0.72
CFAP99D6REC4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.54■□□□□ 0.72
CFAP99D6REC4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP99D6REC4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 AC069544.1-201ENST00000609399 999 ntBASIC19.53■□□□□ 0.72
CFAP99D6REC4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 AL020996.1-203ENST00000536896 2307 ntBASIC19.53■□□□□ 0.72
CFAP99D6REC4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CFAP99D6REC4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP99D6REC4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP99D6REC4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP99D6REC4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP99D6REC4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.52■□□□□ 0.72
CFAP99D6REC4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CFAP99D6REC4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP99D6REC4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP99D6REC4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.52■□□□□ 0.72
CFAP99D6REC4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP99D6REC4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CFAP99D6REC4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.52■□□□□ 0.72
CFAP99D6REC4 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.52■□□□□ 0.72
CFAP99D6REC4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP99D6REC4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP99D6REC4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms