Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM49D1C9J1S8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM49D1C9J1S8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM49D1C9J1S8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 AL355472.2-201ENST00000422958 438 ntBASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM49D1C9J1S8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 DUX4L16-201ENST00000555130 1264 ntBASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM49D1C9J1S8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM49D1C9J1S8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM49D1C9J1S8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
TRIM49D1C9J1S8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM49D1C9J1S8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 AC023632.3-201ENST00000521633 145 ntBASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms