Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 CROCCP3-202ENST00000420820 1947 ntBASIC13.94□□□□□ -0.18
LINC01549A6NIU2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01549A6NIU2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 AC126544.1-201ENST00000580842 1059 ntBASIC13.93□□□□□ -0.18
LINC01549A6NIU2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 AC233992.3-201ENST00000607491 485 ntBASIC13.93□□□□□ -0.18
LINC01549A6NIU2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms