Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00959A0A1B0GUT2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 AL512625.2-201ENST00000417533 625 ntBASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 AC004408.2-201ENST00000623613 2777 ntBASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC00959A0A1B0GUT2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00959A0A1B0GUT2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00959A0A1B0GUT2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00959A0A1B0GUT2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00959A0A1B0GUT2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms