Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 KRT8P8-201ENST00000434750 1448 ntBASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV17A0A0B4J275 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 AP001271.2-201ENST00000624018 1556 ntBASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV17A0A0B4J275 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 ECEL1P2-202ENST00000465689 757 ntBASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV17A0A0B4J275 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 DUX4L26-201ENST00000489078 1255 ntBASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 AC010203.1-204ENST00000548782 407 ntBASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 AC116562.4-202ENST00000641738 218 ntBASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV17A0A0B4J275 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.77■□□□□ 0.43
TRAV17A0A0B4J275 AC096733.2-201ENST00000609937 1394 ntBASIC17.77■□□□□ 0.43
TRAV17A0A0B4J275 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV17A0A0B4J275 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.77■□□□□ 0.43
TRAV17A0A0B4J275 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.77■□□□□ 0.43
TRAV17A0A0B4J275 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV17A0A0B4J275 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.76■□□□□ 0.43
TRAV17A0A0B4J275 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms