Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 AP001271.2-201ENST00000624018 1556 ntBASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV5A0A0B4J249 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 KRT8P20-201ENST00000423953 1409 ntBASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV5A0A0B4J249 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 AC010536.3-201ENST00000620306 533 ntBASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms