Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 RNF146-205ENST00000477776 762 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 SYT6-210ENST00000641643 1587 ntBASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TRAV13-2A0A0B4J235 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 AK3-203ENST00000447596 705 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV13-2A0A0B4J235 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV13-2A0A0B4J235 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV13-2A0A0B4J235 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV13-2A0A0B4J235 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV13-2A0A0B4J235 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV13-2A0A0B4J235 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
TRAV13-2A0A0B4J235 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV13-2A0A0B4J235 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV13-2A0A0B4J235 MOK-225ENST00000522867 1883 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 TSPY9P-201ENST00000440215 945 ntBASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 TSPY11P-201ENST00000442607 1045 ntBASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 AC245052.3-201ENST00000450182 901 ntBASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 AL033527.3-201ENST00000566366 1196 ntBASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 AC018470.1-201ENST00000624790 3129 ntBASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 AC090164.3-201ENST00000610780 2143 ntBASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV13-2A0A0B4J235 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 AC116050.2-201ENST00000612102 1779 ntBASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms