Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 HLA-G-202ENST00000376815 851 ntBASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 HLA-G-203ENST00000376818 1127 ntBASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 CROCCP3-202ENST00000420820 1947 ntBASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-7A0A0A0MS04 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 AC005332.8-201ENST00000622750 2735 ntBASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 CYP2T3P-201ENST00000601990 817 ntBASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 AC087623.3-201ENST00000607047 1098 ntBASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 AL032819.2-201ENST00000624543 2162 ntBASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRBV6-7A0A0A0MS04 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms