Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TRAV27A0A087WT01 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV27A0A087WT01 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 AC018553.1-201ENST00000616682 1458 ntBASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 AC026185.1-201ENST00000445748 174 ntBASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 AL137784.2-201ENST00000607332 1000 ntBASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV27A0A087WT01 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV27A0A087WT01 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV27A0A087WT01 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms