Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 AC007540.1-201ENST00000548473 507 ntTSL 3 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 AC066612.1-203ENST00000560623 481 ntTSL 4 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 AC021818.2-201ENST00000560960 731 ntBASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 C17orf62-210ENST00000577732 1053 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 MIR5571-201ENST00000577998 113 ntBASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 MIR4725-201ENST00000581700 90 ntBASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 LINC00663-204ENST00000588223 565 ntTSL 4 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 AC099518.6-201ENST00000617407 450 ntBASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 SNORA43.4-201ENST00000629559 138 ntBASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 Z82244.2-201ENST00000632196 448 ntBASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 RN7SK-201ENST00000636484 328 ntBASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 AL357143.1-203ENST00000639750 881 ntBASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 NUP85-211ENST00000579324 2010 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 SORL1-206ENST00000527934 3032 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 NECTIN4-201ENST00000368012 3502 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 IGSF11-203ENST00000425327 3525 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 ZNF266-202ENST00000588221 3503 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 EFL1-202ENST00000359445 3470 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 TRPV3-201ENST00000301365 3235 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 MAB21L3-201ENST00000369500 3229 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 TFIP11-203ENST00000407431 2974 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 THBS3-203ENST00000457183 2727 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 OR11A1-202ENST00000377148 2482 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 PAX6-257ENST00000639409 2450 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 ARSJ-201ENST00000315366 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 CSRP1-216ENST00000532460 1469 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 CLSTN3-201ENST00000266546 4185 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 AC016526.3-201ENST00000624275 3931 ntBASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 ZWILCH-214ENST00000613446 3181 ntTSL 5 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 AC019155.2-201ENST00000420224 1918 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 RABGEF1-208ENST00000510829 3553 ntTSL 5 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 CAP2-201ENST00000229922 3316 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 LASP1-203ENST00000433206 4023 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 POLR3C-201ENST00000334163 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 USP28-201ENST00000003302 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 AC018512.1-201ENST00000417761 2326 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
KRTAP3-3Q9BYR6 JUP-203ENST00000393931 3497 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 SIGLEC10-206ENST00000441969 2768 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 LDB2-201ENST00000304523 2548 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 SRC-201ENST00000358208 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 ZMYND11-205ENST00000381607 3898 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 KIAA1683-207ENST00000600359 3871 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 AL031666.2-201ENST00000599904 2253 ntBASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 RAD9B-204ENST00000409300 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 SAGE4P-201ENST00000442271 3381 ntBASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 BCO2-213ENST00000531169 2493 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 ECE1-202ENST00000357071 3763 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 TFAP2A-203ENST00000379613 3317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 MUC13-205ENST00000616727 2879 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 AC006213.2-201ENST00000587128 2193 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 KAT7-202ENST00000424009 3469 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 PTK7-213ENST00000481273 3436 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 PPP6R3-205ENST00000524845 2771 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 U3.1-201ENST00000362500 215 ntBASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 RNA5SP370-201ENST00000362545 121 ntBASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 RNU6-527P-201ENST00000363425 104 ntBASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 RNU6-1229P-201ENST00000364295 107 ntBASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 Y_RNA.265-201ENST00000364677 108 ntBASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 BNIPL-203ENST00000368931 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 Y_RNA.545-201ENST00000384652 105 ntBASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 KRT8P40-201ENST00000392131 563 ntBASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 ENSAP1-201ENST00000392855 326 ntBASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 SRSF9P1-201ENST00000399149 530 ntBASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 RBM14-203ENST00000409372 876 ntTSL 2 BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 RPL31P2-201ENST00000413849 377 ntBASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 MAPT-207ENST00000420682 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRTAP3-3Q9BYR6 AP001631.1-201ENST00000433840 1052 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms