Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AC105342.1-201ENST00000378334 6848 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 OFD1P17-201ENST00000437639 3018 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 HMGB3P7-201ENST00000400214 611 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 RPL23AP1-201ENST00000428990 471 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AP000769.2-201ENST00000602344 396 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 CASC19-255ENST00000641733 1385 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AC006065.1-201ENST00000422539 802 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 RN7SL352P-201ENST00000466002 277 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AC074255.1-201ENST00000511259 501 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 MED28P5-201ENST00000528254 438 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AL049779.3-201ENST00000557141 606 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AC005377.1-201ENST00000605126 456 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 SNORA70F-201ENST00000384142 135 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 EI24P4-201ENST00000423683 1078 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 TXNP5-201ENST00000441043 315 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AC013356.1-201ENST00000489027 564 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AC023575.1-201ENST00000580510 358 ntBASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSMD1Q96PZ7 FAM71F2-205ENST00000641605 5749 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 CYP1D1P-201ENST00000416662 1433 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AL596266.1-201ENST00000448132 400 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AC006967.1-201ENST00000467608 589 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 OR5M2P-201ENST00000529003 936 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AC007346.2-201ENST00000564816 892 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 KPNA2P3-201ENST00000584190 848 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 ERG-204ENST00000398907 4809 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms