Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 IGKV3D-25-201ENST00000519599 235 ntBASIC5.7□□□□□ -1.5
VMP1Q96GC9 OR4V1P-201ENST00000525394 1140 ntBASIC5.7□□□□□ -1.5
VMP1Q96GC9 OR6M2P-201ENST00000529831 871 ntBASIC5.7□□□□□ -1.5
VMP1Q96GC9 AC005363.1-201ENST00000530779 351 ntBASIC5.7□□□□□ -1.5
VMP1Q96GC9 NPM1P35-201ENST00000533043 868 ntBASIC5.7□□□□□ -1.5
VMP1Q96GC9 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VMP1Q96GC9 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 CYCSP38-201ENST00000559840 322 ntBASIC5.7□□□□□ -1.5
VMP1Q96GC9 DPRXP4-201ENST00000578053 568 ntBASIC5.7□□□□□ -1.5
VMP1Q96GC9 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 MTCO2P22-201ENST00000603246 681 ntBASIC5.7□□□□□ -1.5
VMP1Q96GC9 AC022387.2-201ENST00000604050 448 ntBASIC5.7□□□□□ -1.5
VMP1Q96GC9 AC141002.1-201ENST00000607025 279 ntBASIC5.7□□□□□ -1.5
VMP1Q96GC9 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 AC138965.3-201ENST00000623875 498 ntBASIC5.7□□□□□ -1.5
VMP1Q96GC9 AC016583.1-201ENST00000624221 2431 ntBASIC5.7□□□□□ -1.5
VMP1Q96GC9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VMP1Q96GC9 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.7□□□□□ -1.5
VMP1Q96GC9 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VMP1Q96GC9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AL354854.1-201ENST00000455940 1363 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC083899.1-201ENST00000454465 3819 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 RN7SKP224-201ENST00000364140 325 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 U3.10-201ENST00000364459 214 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 DHFRP5-201ENST00000406944 564 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 SNORA77.2-201ENST00000408571 112 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 RN7SKP240-201ENST00000410583 375 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 RFESDP1-201ENST00000422350 461 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 RPS27AP6-201ENST00000427962 448 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC073410.1-201ENST00000435125 589 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 FTLP8-201ENST00000446770 267 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 LDHBP2-201ENST00000456969 1005 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC073594.1-201ENST00000462065 364 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AL158068.1-201ENST00000506116 616 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AP003396.4-201ENST00000527574 265 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC009852.2-201ENST00000567898 485 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 AC068768.2-201ENST00000602352 343 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 AL645933.2-201ENST00000606743 1207 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.69□□□□□ -1.5
VMP1Q96GC9 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VMP1Q96GC9 MTCO1P8-201ENST00000416914 1523 ntBASIC5.69□□□□□ -1.5
VMP1Q96GC9 RBMY1HP-201ENST00000382759 1389 ntBASIC5.68□□□□□ -1.5
VMP1Q96GC9 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VMP1Q96GC9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms