Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL359263.1-201ENST00000441188 2796 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH1Q08174 AP000866.6-201ENST00000638898 3579 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDH1Q08174 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH1Q08174 RPL12P13-201ENST00000310055 497 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH1Q08174 MIR525-201ENST00000384978 85 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PCDH1Q08174 SNORD65.1-201ENST00000390889 71 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AL034403.1-201ENST00000399414 885 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 NCSTNP1-201ENST00000406229 144 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AC013404.1-201ENST00000413068 249 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH1Q08174 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDH1Q08174 AL121916.1-201ENST00000429405 308 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.9□□□□□ -1.3
PCDH1Q08174 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH1Q08174 PHBP4-201ENST00000437447 837 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AL138787.1-202ENST00000437804 898 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 SNX18P9-201ENST00000440580 835 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDH1Q08174 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH1Q08174 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH1Q08174 AC093799.1-201ENST00000452411 499 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 HSPE1P22-201ENST00000456856 327 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH1Q08174 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDH1Q08174 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.9□□□□□ -1.3
PCDH1Q08174 AC117522.1-201ENST00000509821 380 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH1Q08174 AC087808.1-201ENST00000520501 361 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AC083923.1-201ENST00000523708 376 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH1Q08174 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH1Q08174 OR7K1P-201ENST00000546439 926 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH1Q08174 NDUFA3P4-201ENST00000560814 250 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDH1Q08174 AC243312.1-201ENST00000570582 275 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AP005262.1-201ENST00000582646 997 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH1Q08174 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.9□□□□□ -1.3
PCDH1Q08174 AC006116.6-201ENST00000593258 1103 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 RNU4-89P-201ENST00000607443 133 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AC005962.2-201ENST00000611427 652 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AL121809.2-201ENST00000613169 341 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH1Q08174 STMN1P1-201ENST00000617809 440 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 AC007742.2-201ENST00000618226 398 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH1Q08174 AC099654.5-201ENST00000636479 350 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDH1Q08174 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH1Q08174 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDH1Q08174 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
PCDH1Q08174 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH1Q08174 AC109315.1-201ENST00000584143 1347 ntBASIC6.9□□□□□ -1.3
PCDH1Q08174 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
PCDH1Q08174 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PCDH1Q08174 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDH1Q08174 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDH1Q08174 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.9□□□□□ -1.31
PCDH1Q08174 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
PCDH1Q08174 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
PCDH1Q08174 AC022306.1-201ENST00000560489 1562 ntBASIC6.9□□□□□ -1.31
PCDH1Q08174 AC079178.2-201ENST00000439323 1624 ntBASIC6.9□□□□□ -1.31
PCDH1Q08174 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDH1Q08174 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDH1Q08174 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PCDH1Q08174 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PCDH1Q08174 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
PCDH1Q08174 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
PCDH1Q08174 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
PCDH1Q08174 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 AC034111.1-201ENST00000562143 3770 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PCDH1Q08174 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PCDH1Q08174 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
PCDH1Q08174 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDH1Q08174 Y_RNA.554-201ENST00000384672 102 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDH1Q08174 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 MIR1231-201ENST00000408101 92 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 MEAF6P1-201ENST00000416092 327 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 UBTFL3-201ENST00000418934 1024 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
PCDH1Q08174 PTP4A1P1-201ENST00000420539 515 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AL109913.1-201ENST00000421173 514 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDH1Q08174 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms