Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RN7SKP59-201ENST00000410520 314 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 RN7SKP89-201ENST00000410774 242 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC073136.2-201ENST00000417282 849 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 PIGFP2-201ENST00000421400 651 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC130472.1-201ENST00000427885 309 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 RPL34P27-201ENST00000428810 349 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 OR2B7P-201ENST00000429302 934 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC007000.1-201ENST00000453064 794 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 DHFRP3-201ENST00000455595 559 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 RN7SL19P-201ENST00000462522 306 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC087385.2-201ENST00000477729 498 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC090096.1-201ENST00000489168 390 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC114801.1-201ENST00000512633 297 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 BTF3P13-201ENST00000513224 490 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 RNU6-1170P-201ENST00000515974 106 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 RNA5SP75-201ENST00000516841 111 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 MIR3137-201ENST00000577367 75 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 MIR4503-201ENST00000582187 83 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 MIR3159-201ENST00000584572 74 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC016629.2-201ENST00000597341 199 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC007621.1-201ENST00000604544 437 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 BNIP3P4-201ENST00000604946 565 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AL137000.1-201ENST00000610528 1244 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC069499.2-201ENST00000610665 382 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AP004607.9-201ENST00000618202 316 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AC015908.5-201ENST00000623289 343 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 TNFSF15-201ENST00000374044 2789 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 AL118496.1-201ENST00000440201 1812 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 OFD1P9Y-201ENST00000417699 1491 ntBASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCUBE3Q8IX30 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC092999.1-201ENST00000624004 1924 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AL449283.1-201ENST00000602631 3403 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 Y_RNA.157-201ENST00000363638 102 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 RNU2-62P-201ENST00000410868 191 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC092042.2-201ENST00000417304 331 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 RPL35AP12-201ENST00000425362 338 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 BLOC1S2P1-201ENST00000428431 301 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 OR5M13P-201ENST00000433944 937 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC009961.2-201ENST00000435771 251 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AL137074.1-201ENST00000442640 465 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC002553.1-201ENST00000442828 802 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 RPL23AP20-201ENST00000447965 421 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 MTCO2P29-201ENST00000465212 189 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 RN7SL414P-201ENST00000469545 294 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 FTH1P23-201ENST00000492727 550 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 RN7SL124P-201ENST00000498656 285 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC108078.3-201ENST00000502633 489 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AL445187.1-201ENST00000502685 260 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC084871.2-201ENST00000503355 464 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC093809.1-201ENST00000509155 340 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC108120.2-201ENST00000512973 294 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 RPL7L1P4-201ENST00000513004 707 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC108064.1-201ENST00000513791 460 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 RNU7-30P-201ENST00000516835 62 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 IGLV10-67-201ENST00000519446 325 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 IGJP1-201ENST00000522682 475 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms