Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.15□□□□□ -1.59
RFX4Q33E94 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.15□□□□□ -1.59
RFX4Q33E94 MIR3154-201ENST00000577829 84 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.15□□□□□ -1.59
RFX4Q33E94 MIR4502-201ENST00000580432 81 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 PRPF19P1-201ENST00000584766 898 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 AC108673.3-201ENST00000609183 335 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 AF287957.1-201ENST00000607368 1595 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RFX4Q33E94 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFX4Q33E94 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFX4Q33E94 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFX4Q33E94 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RFX4Q33E94 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.15□□□□□ -1.59
RFX4Q33E94 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.15□□□□□ -1.59
RFX4Q33E94 AC068870.1-201ENST00000563737 2455 ntBASIC5.15□□□□□ -1.59
RFX4Q33E94 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFX4Q33E94 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RFX4Q33E94 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFX4Q33E94 AC093225.1-201ENST00000506867 1408 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 AC090181.3-201ENST00000624777 1514 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.14□□□□□ -1.59
RFX4Q33E94 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 SMG1P4-204ENST00000523028 4131 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 CTSL3P-202ENST00000412179 788 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 AL357752.1-201ENST00000412817 349 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 AL354890.1-201ENST00000413730 346 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.14□□□□□ -1.59
RFX4Q33E94 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 RPSAP41-201ENST00000439695 860 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 ATP5LP2-201ENST00000440646 311 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RFX4Q33E94 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 AC093166.4-201ENST00000457867 318 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 AC023194.2-201ENST00000465398 406 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 AL122020.1-201ENST00000472287 459 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 AC135999.1-201ENST00000478962 479 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 AC021006.1-201ENST00000489849 553 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 AC092349.1-201ENST00000504903 310 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 SCARNA18.1-201ENST00000516330 83 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 RN7SKP238-201ENST00000516483 249 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 TMEM97P2-201ENST00000517841 403 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 AC092709.1-201ENST00000521355 1045 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.14□□□□□ -1.59
RFX4Q33E94 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 PCNAP4-201ENST00000532690 730 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.14□□□□□ -1.59
RFX4Q33E94 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.14□□□□□ -1.59
RFX4Q33E94 MIR4311-201ENST00000580794 100 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 MIR6793-201ENST00000612376 63 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RFX4Q33E94 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.14□□□□□ -1.59
RFX4Q33E94 AC103703.1-201ENST00000634783 663 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 CASC19-274ENST00000642018 970 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 PDZK1P1-202ENST00000425209 1350 ntBASIC5.14□□□□□ -1.59
RFX4Q33E94 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
RFX4Q33E94 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX4Q33E94 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.13□□□□□ -1.59
RFX4Q33E94 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFX4Q33E94 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFX4Q33E94 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
RFX4Q33E94 CASC19-238ENST00000641523 1558 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.13□□□□□ -1.59
RFX4Q33E94 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RFX4Q33E94 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RFX4Q33E94 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.13□□□□□ -1.59
RFX4Q33E94 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.13□□□□□ -1.59
RFX4Q33E94 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFX4Q33E94 RN7SKP171-201ENST00000364417 303 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 EI24P3-201ENST00000399046 1062 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.13□□□□□ -1.59
RFX4Q33E94 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.13□□□□□ -1.59
RFX4Q33E94 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RFX4Q33E94 AL354893.1-201ENST00000433735 348 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 CYCSP24-201ENST00000445119 316 ntBASIC5.13□□□□□ -1.59
RFX4Q33E94 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms