Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.7□□□□□ -1.34
EPHB3P54753 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
EPHB3P54753 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
EPHB3P54753 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.7□□□□□ -1.34
EPHB3P54753 COX6B1P3-201ENST00000312310 260 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
EPHB3P54753 RN7SKP15-201ENST00000364742 309 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.7□□□□□ -1.34
EPHB3P54753 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.7□□□□□ -1.34
EPHB3P54753 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.7□□□□□ -1.34
EPHB3P54753 AL023284.3-201ENST00000407767 334 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 SNORA77.2-201ENST00000408571 112 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AL449283.1-202ENST00000418249 604 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.7□□□□□ -1.34
EPHB3P54753 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.7□□□□□ -1.34
EPHB3P54753 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.7□□□□□ -1.34
EPHB3P54753 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
EPHB3P54753 RPL6P30-201ENST00000443382 862 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.7□□□□□ -1.34
EPHB3P54753 AC092691.2-201ENST00000461787 803 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 MTND3P7-201ENST00000474435 343 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 RN7SL705P-201ENST00000481678 294 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.7□□□□□ -1.34
EPHB3P54753 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.7□□□□□ -1.34
EPHB3P54753 AC021146.8-201ENST00000507455 733 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.7□□□□□ -1.34
EPHB3P54753 AC106800.3-201ENST00000511389 308 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC6.7□□□□□ -1.34
EPHB3P54753 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.7□□□□□ -1.34
EPHB3P54753 FABP5P12-201ENST00000515543 389 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 RNU6-1178P-201ENST00000516674 107 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
EPHB3P54753 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.7□□□□□ -1.34
EPHB3P54753 OR4A42P-201ENST00000531397 938 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.7□□□□□ -1.34
EPHB3P54753 AC090115.2-201ENST00000548060 883 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC6.7□□□□□ -1.34
EPHB3P54753 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.7□□□□□ -1.34
EPHB3P54753 AC135628.1-201ENST00000568867 534 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 MRPS21P9-201ENST00000571150 257 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AC015818.6-201ENST00000584274 634 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.7□□□□□ -1.34
EPHB3P54753 AL138895.2-201ENST00000603019 178 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AC011451.2-201ENST00000604303 598 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AC079610.2-201ENST00000604818 690 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AC092681.3-201ENST00000609463 678 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 TUSC7.1-201ENST00000610969 165 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AC009163.6-201ENST00000612367 342 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AL354976.1-201ENST00000613843 387 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AL132640.3-201ENST00000630473 177 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
EPHB3P54753 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
EPHB3P54753 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
EPHB3P54753 AL136984.1-201ENST00000607611 1893 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.7□□□□□ -1.34
EPHB3P54753 DDX18P5-201ENST00000534547 1306 ntBASIC6.7□□□□□ -1.34
EPHB3P54753 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.7□□□□□ -1.34
EPHB3P54753 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
EPHB3P54753 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
EPHB3P54753 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
EPHB3P54753 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
EPHB3P54753 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
EPHB3P54753 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
EPHB3P54753 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
EPHB3P54753 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.69□□□□□ -1.34
EPHB3P54753 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
EPHB3P54753 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 HSPD1P9-201ENST00000420325 1636 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 AL390237.1-201ENST00000404226 1415 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.69□□□□□ -1.34
EPHB3P54753 AC027575.3-201ENST00000583058 2747 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
EPHB3P54753 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
EPHB3P54753 OR2M1P-201ENST00000318104 951 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
EPHB3P54753 RN7SKP275-201ENST00000364626 301 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.69□□□□□ -1.34
EPHB3P54753 RN7SKP144-201ENST00000411108 279 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 SETP15-201ENST00000412724 337 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 ELOCP17-201ENST00000414751 326 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 MTND4LP21-201ENST00000415303 295 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 AL008987.1-201ENST00000415528 237 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.69□□□□□ -1.34
EPHB3P54753 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.69□□□□□ -1.34
EPHB3P54753 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 MTATP6P13-201ENST00000438531 667 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms