Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
RFX1P22670 CDY7P-201ENST00000429883 1604 ntBASIC7.86□□□□□ -1.15
RFX1P22670 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
RFX1P22670 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.86□□□□□ -1.15
RFX1P22670 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
RFX1P22670 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
RFX1P22670 TMSB4XP8-201ENST00000402089 135 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AL451061.1-201ENST00000407887 862 ntBASIC7.86□□□□□ -1.15
RFX1P22670 SNORA11.3-201ENST00000408471 128 ntBASIC7.86□□□□□ -1.15
RFX1P22670 TMSB4XP6-201ENST00000415187 135 ntBASIC7.86□□□□□ -1.15
RFX1P22670 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.86□□□□□ -1.15
RFX1P22670 FTOP1-201ENST00000419363 861 ntBASIC7.86□□□□□ -1.15
RFX1P22670 TMSB4XP1-201ENST00000424567 135 ntBASIC7.86□□□□□ -1.15
RFX1P22670 MRPS10P2-201ENST00000431226 381 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.86□□□□□ -1.15
RFX1P22670 AC242426.1-201ENST00000435270 960 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.86□□□□□ -1.15
RFX1P22670 PSPC1P2-201ENST00000455130 225 ntBASIC7.86□□□□□ -1.15
RFX1P22670 SNRPGP9-201ENST00000456025 225 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC005165.2-201ENST00000466070 380 ntBASIC7.86□□□□□ -1.15
RFX1P22670 RN7SL688P-201ENST00000471754 275 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC044810.1-201ENST00000480271 711 ntBASIC7.86□□□□□ -1.15
RFX1P22670 MRPL57P6-201ENST00000506570 309 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC090071.1-201ENST00000507713 644 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC7.86□□□□□ -1.15
RFX1P22670 IGLV1-62-201ENST00000518003 441 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AP005902.2-201ENST00000518393 307 ntBASIC7.86□□□□□ -1.15
RFX1P22670 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC131935.1-201ENST00000524621 333 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.86□□□□□ -1.15
RFX1P22670 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.86□□□□□ -1.15
RFX1P22670 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.86□□□□□ -1.15
RFX1P22670 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.86□□□□□ -1.15
RFX1P22670 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC7.86□□□□□ -1.15
RFX1P22670 CCNG2P1-201ENST00000549521 1000 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC7.86□□□□□ -1.15
RFX1P22670 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
RFX1P22670 AL109628.1-201ENST00000556877 366 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.86□□□□□ -1.15
RFX1P22670 MIR3135A-201ENST00000578460 77 ntBASIC7.86□□□□□ -1.15
RFX1P22670 MTND1P15-201ENST00000579262 949 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC061975.3-201ENST00000583209 244 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.86□□□□□ -1.15
RFX1P22670 AL023806.2-201ENST00000603042 263 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC108451.2-201ENST00000603875 538 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AL355333.1-201ENST00000605632 279 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC068276.1-201ENST00000605793 379 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC091946.2-201ENST00000606105 291 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC106028.5-201ENST00000610332 395 ntBASIC7.86□□□□□ -1.15
RFX1P22670 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 AL356274.1-201ENST00000617064 410 ntBASIC7.86□□□□□ -1.15
RFX1P22670 SNORA11.6-201ENST00000619030 128 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AC145207.9-201ENST00000623802 325 ntBASIC7.86□□□□□ -1.15
RFX1P22670 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.86□□□□□ -1.15
RFX1P22670 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.86□□□□□ -1.15
RFX1P22670 AC026108.1-201ENST00000635444 547 ntBASIC7.86□□□□□ -1.15
RFX1P22670 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.86□□□□□ -1.15
RFX1P22670 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.86□□□□□ -1.15
RFX1P22670 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
RFX1P22670 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 TPTE2P2-201ENST00000403471 1466 ntBASIC7.86□□□□□ -1.15
RFX1P22670 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.86□□□□□ -1.15
RFX1P22670 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
RFX1P22670 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.86□□□□□ -1.15
RFX1P22670 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 SAMMSON-203ENST00000641005 2168 ntBASIC7.86□□□□□ -1.15
RFX1P22670 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.85□□□□□ -1.15
RFX1P22670 AC093844.1-201ENST00000514910 1361 ntBASIC7.85□□□□□ -1.15
RFX1P22670 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 AC091544.5-201ENST00000620192 3815 ntBASIC7.85□□□□□ -1.15
RFX1P22670 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.85□□□□□ -1.15
RFX1P22670 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
RFX1P22670 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
RFX1P22670 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
RFX1P22670 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.85□□□□□ -1.15
RFX1P22670 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
RFX1P22670 SNORA75-201ENST00000384158 137 ntBASIC7.85□□□□□ -1.15
RFX1P22670 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
RFX1P22670 SOD1P1-201ENST00000407803 440 ntBASIC7.85□□□□□ -1.15
RFX1P22670 RN7SKP232-201ENST00000410170 290 ntBASIC7.85□□□□□ -1.15
RFX1P22670 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC7.85□□□□□ -1.15
RFX1P22670 AL390840.1-201ENST00000420303 988 ntBASIC7.85□□□□□ -1.15
RFX1P22670 CDC42P6-201ENST00000421246 576 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms