Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 SAMM50P1-201ENST00000455403 1399 ntBASIC6.82□□□□□ -1.32
RGPD3A6NKT7 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 AC100871.1-201ENST00000507871 1456 ntBASIC6.82□□□□□ -1.32
RGPD3A6NKT7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 ELOCP19-201ENST00000411919 318 ntBASIC6.82□□□□□ -1.32
RGPD3A6NKT7 CHEK2P3-201ENST00000416118 248 ntBASIC6.82□□□□□ -1.32
RGPD3A6NKT7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.82□□□□□ -1.32
RGPD3A6NKT7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 TXNP2-201ENST00000443918 295 ntBASIC6.82□□□□□ -1.32
RGPD3A6NKT7 AC104634.1-201ENST00000452720 462 ntBASIC6.82□□□□□ -1.32
RGPD3A6NKT7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 PARP1P2-201ENST00000556806 195 ntBASIC6.82□□□□□ -1.32
RGPD3A6NKT7 AL512782.1-201ENST00000603093 364 ntBASIC6.82□□□□□ -1.32
RGPD3A6NKT7 AC091932.2-201ENST00000623014 291 ntBASIC6.82□□□□□ -1.32
RGPD3A6NKT7 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 DOCK11P1-201ENST00000553480 5932 ntBASIC6.82□□□□□ -1.32
RGPD3A6NKT7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.82□□□□□ -1.32
RGPD3A6NKT7 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 SNORD56.6-201ENST00000384569 71 ntBASIC6.81□□□□□ -1.32
RGPD3A6NKT7 TMA16P2-201ENST00000413187 601 ntBASIC6.81□□□□□ -1.32
RGPD3A6NKT7 AC007568.1-201ENST00000422912 471 ntBASIC6.81□□□□□ -1.32
RGPD3A6NKT7 AC009480.2-201ENST00000422916 432 ntBASIC6.81□□□□□ -1.32
RGPD3A6NKT7 AC007559.1-201ENST00000428736 355 ntBASIC6.81□□□□□ -1.32
RGPD3A6NKT7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 RN7SKP253-201ENST00000516424 309 ntBASIC6.81□□□□□ -1.32
RGPD3A6NKT7 OR5AM1P-201ENST00000532136 1032 ntBASIC6.81□□□□□ -1.32
RGPD3A6NKT7 GCSHP4-201ENST00000538792 439 ntBASIC6.81□□□□□ -1.32
RGPD3A6NKT7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 AC098935.2-201ENST00000604222 466 ntBASIC6.81□□□□□ -1.32
RGPD3A6NKT7 AL683813.2-201ENST00000605245 502 ntBASIC6.81□□□□□ -1.32
RGPD3A6NKT7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.81□□□□□ -1.32
RGPD3A6NKT7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 BX284613.1-201ENST00000452221 1641 ntBASIC6.81□□□□□ -1.32
RGPD3A6NKT7 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RGPD3A6NKT7 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.8□□□□□ -1.32
RGPD3A6NKT7 SNORA70H-201ENST00000383910 135 ntBASIC6.8□□□□□ -1.32
RGPD3A6NKT7 SNORA70J-201ENST00000384182 135 ntBASIC6.8□□□□□ -1.32
RGPD3A6NKT7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 AC012512.1-201ENST00000446594 718 ntBASIC6.8□□□□□ -1.32
RGPD3A6NKT7 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 AC092653.1-201ENST00000608509 531 ntBASIC6.8□□□□□ -1.32
RGPD3A6NKT7 AL359757.1-201ENST00000623176 255 ntBASIC6.8□□□□□ -1.32
RGPD3A6NKT7 AC011944.2-201ENST00000624440 683 ntBASIC6.8□□□□□ -1.32
RGPD3A6NKT7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 DHX40P1-201ENST00000588725 1412 ntBASIC6.8□□□□□ -1.32
RGPD3A6NKT7 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.8□□□□□ -1.32
RGPD3A6NKT7 AP004607.3-201ENST00000530354 3915 ntBASIC6.8□□□□□ -1.32
RGPD3A6NKT7 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms