Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 RNA5SP188-201ENST00000362916 129 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 RNU6-878P-201ENST00000384578 110 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 CREM-214ENST00000395887 849 ntTSL 5 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 RPS27AP11-201ENST00000402798 447 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 RNU2-47P-201ENST00000410649 186 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 NRBF2P2-201ENST00000413087 861 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 BRK1P2-201ENST00000442875 223 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 MTND1P9-201ENST00000453775 944 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 AC233279.1-201ENST00000455300 423 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 RN7SL149P-201ENST00000465197 281 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 RN7SL655P-201ENST00000486087 298 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 RPS4XP15-201ENST00000489210 795 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 OR5M4P-201ENST00000529436 925 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 AC087257.2-201ENST00000538759 928 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 RARSP1-201ENST00000542842 1418 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 AC008737.2-201ENST00000599446 118 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 MIR7109-201ENST00000613748 65 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 AL121890.2-201ENST00000617644 465 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 MIR6778-201ENST00000617912 73 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 MIR1321-201ENST00000637766 79 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 AC090983.1-201ENST00000623426 3897 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 AC069222.1-201ENST00000608028 3360 ntBASIC8.84□□□□□ -0.99
HPS5Q9UPZ3 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
HPS5Q9UPZ3 AC087045.3-201ENST00000623046 2468 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 SF3A3P1-201ENST00000446317 1477 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 HSPA8P11-201ENST00000508840 1898 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC104964.2-201ENST00000562242 4641 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HPS5Q9UPZ3 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 RNA5SP260-201ENST00000363849 111 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 SSX6-201ENST00000376932 562 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 Y_RNA.459-201ENST00000384251 102 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC104297.1-201ENST00000393779 870 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 RAB28P1-201ENST00000411517 641 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 RSU1P3-201ENST00000412878 835 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 TAF13P2-201ENST00000416876 286 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 GAPDHP73-201ENST00000423411 1007 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AL389925.1-201ENST00000432257 728 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 RPL39P6-201ENST00000448289 150 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC140076.1-201ENST00000449897 361 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC144530.1-201ENST00000452862 555 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 MRPS21P1-201ENST00000453850 223 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 RN7SL55P-201ENST00000464534 297 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC002456.2-201ENST00000509356 380 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC104108.1-201ENST00000509930 412 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 OR7E96P-201ENST00000530816 976 ntBASIC8.83□□□□□ -1
HPS5Q9UPZ3 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.83□□□□□ -1
HPS5Q9UPZ3 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms