Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AP005432.2-201ENST00000608162 586 ntBASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 RNU4-25P-201ENST00000410569 230 ntBASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 AC007568.1-201ENST00000422912 471 ntBASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 TOMM22P4-201ENST00000511318 336 ntBASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 YWHABP2-201ENST00000540201 713 ntBASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 CYCSP1-201ENST00000604815 315 ntBASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 AC006133.1-201ENST00000617106 264 ntBASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 AL137100.1-201ENST00000556703 1620 ntBASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 AC097063.1-201ENST00000426714 1797 ntBASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 AC096775.1-201ENST00000437724 448 ntBASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 CYP4F27P-201ENST00000514557 494 ntBASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.47□□□□□ -1.69
CSMD1Q96PZ7 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CSMD1Q96PZ7 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CSMD1Q96PZ7 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CSMD1Q96PZ7 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC4.46□□□□□ -1.69
CSMD1Q96PZ7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CSMD1Q96PZ7 TEK-204ENST00000519097 3836 ntTSL 2 BASIC4.46□□□□□ -1.69
CSMD1Q96PZ7 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AC092747.4-201ENST00000620519 1861 ntBASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 RPS3AP23-201ENST00000401762 784 ntBASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AL445189.1-201ENST00000405722 338 ntBASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AC005154.2-201ENST00000438110 379 ntBASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 snoU13.1-201ENST00000459157 104 ntBASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 MORF4L1P3-201ENST00000525966 950 ntBASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AC004232.3-201ENST00000622977 525 ntBASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 TBC1D15-217ENST00000550746 6184 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 USP3-201ENST00000268049 5311 ntTSL 5 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AL121886.1-201ENST00000358609 435 ntBASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AL356218.2-201ENST00000605264 187 ntBASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 CASC19-260ENST00000641828 2001 ntBASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CSMD1Q96PZ7 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 CYP2AC1P-201ENST00000407830 1173 ntBASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 MEMO1P5-201ENST00000604810 406 ntBASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 AP001885.1-201ENST00000621658 558 ntBASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 AL031651.1-201ENST00000615357 1438 ntBASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 RN7SKP224-201ENST00000364140 325 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms