Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 TTC3P1-201ENST00000399586 6081 ntBASIC8.92□□□□□ -0.98
PTPREP23469 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
PTPREP23469 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8.92□□□□□ -0.98
PTPREP23469 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.92□□□□□ -0.98
PTPREP23469 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 FOLH1B-202ENST00000529567 2145 ntBASIC8.92□□□□□ -0.98
PTPREP23469 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC8.91□□□□□ -0.98
PTPREP23469 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
PTPREP23469 AC051619.3-201ENST00000560646 2426 ntBASIC8.91□□□□□ -0.98
PTPREP23469 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.91□□□□□ -0.98
PTPREP23469 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 DCAF13P3-201ENST00000561147 1334 ntBASIC8.91□□□□□ -0.98
PTPREP23469 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 RNU6-31P-201ENST00000384388 108 ntBASIC8.91□□□□□ -0.98
PTPREP23469 SNORD65.1-201ENST00000390889 71 ntBASIC8.91□□□□□ -0.98
PTPREP23469 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.91□□□□□ -0.98
PTPREP23469 AC009161.1-201ENST00000417306 376 ntBASIC8.91□□□□□ -0.98
PTPREP23469 B3GALNT1P1-201ENST00000420569 975 ntBASIC8.91□□□□□ -0.98
PTPREP23469 AL353678.1-201ENST00000422735 741 ntBASIC8.91□□□□□ -0.98
PTPREP23469 FCF1P1-201ENST00000432690 571 ntBASIC8.91□□□□□ -0.98
PTPREP23469 AL354983.1-201ENST00000434580 906 ntBASIC8.91□□□□□ -0.98
PTPREP23469 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC8.91□□□□□ -0.98
PTPREP23469 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
PTPREP23469 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.91□□□□□ -0.98
PTPREP23469 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC8.91□□□□□ -0.98
PTPREP23469 RN7SL861P-201ENST00000473793 285 ntBASIC8.91□□□□□ -0.98
PTPREP23469 RPS10P28-201ENST00000480396 498 ntBASIC8.91□□□□□ -0.98
PTPREP23469 AL163540.1-201ENST00000485382 386 ntBASIC8.91□□□□□ -0.98
PTPREP23469 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC8.91□□□□□ -0.98
PTPREP23469 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.91□□□□□ -0.98
PTPREP23469 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.91□□□□□ -0.98
PTPREP23469 OR4A45P-201ENST00000529954 901 ntBASIC8.91□□□□□ -0.98
PTPREP23469 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC8.91□□□□□ -0.98
PTPREP23469 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.91□□□□□ -0.98
PTPREP23469 NDFIP1P1-201ENST00000543144 525 ntBASIC8.91□□□□□ -0.98
PTPREP23469 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC8.91□□□□□ -0.98
PTPREP23469 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC8.91□□□□□ -0.98
PTPREP23469 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC8.91□□□□□ -0.98
PTPREP23469 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
PTPREP23469 RNU6-88P-201ENST00000606801 100 ntBASIC8.91□□□□□ -0.98
PTPREP23469 RMST_3.1-201ENST00000611651 109 ntBASIC8.91□□□□□ -0.98
PTPREP23469 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
PTPREP23469 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.91□□□□□ -0.98
PTPREP23469 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PTPREP23469 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PTPREP23469 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC8.9□□□□□ -0.98
PTPREP23469 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PTPREP23469 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PTPREP23469 MAPK10-354ENST00000641823 2732 ntBASIC8.9□□□□□ -0.98
PTPREP23469 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PTPREP23469 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC8.9□□□□□ -0.98
PTPREP23469 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PTPREP23469 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PTPREP23469 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PTPREP23469 VN2R3P-201ENST00000422626 1412 ntBASIC8.9□□□□□ -0.98
PTPREP23469 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8.9□□□□□ -0.98
PTPREP23469 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PTPREP23469 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PTPREP23469 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PTPREP23469 PSMC1P7-201ENST00000495689 1315 ntBASIC8.9□□□□□ -0.98
PTPREP23469 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC8.9□□□□□ -0.98
PTPREP23469 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms