Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
MACF1Q9UPN3 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
MACF1Q9UPN3 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
MACF1Q9UPN3 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
MACF1Q9UPN3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
MACF1Q9UPN3 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
MACF1Q9UPN3 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
MACF1Q9UPN3 RN7SKP106-201ENST00000410832 272 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC092106.1-201ENST00000444291 373 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 CAB39P1-201ENST00000502277 460 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC073916.1-201ENST00000545095 130 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC040958.1-201ENST00000561102 201 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 CYP4A44P-201ENST00000569984 154 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 MIR4311-201ENST00000580794 100 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC104984.5-201ENST00000586878 94 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC015813.6-201ENST00000624409 5808 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 RNU1-13P-201ENST00000384499 162 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC073091.2-201ENST00000603205 907 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AP003789.1-201ENST00000617737 605 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 NIFKP3-201ENST00000417799 865 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 RPL7P9-201ENST00000468715 747 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC097486.1-201ENST00000515331 210 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 MAST4-201ENST00000261569 7664 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 EI24P4-201ENST00000423683 1078 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 RN7SL303P-201ENST00000469773 251 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC005341.1-201ENST00000571086 708 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 SNORA70D-201ENST00000578836 135 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC104162.1-201ENST00000430831 2382 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AL121657.1-201ENST00000327215 531 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 MIR130A-201ENST00000385274 89 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC097374.1-203ENST00000400783 485 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC079804.1-201ENST00000461922 436 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 FCF1-203ENST00000553615 954 ntTSL 3 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms